Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4507 |
Symbol | recN |
ID | 1186190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5078600 |
End bp | 5080273 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395848 |
Product | DNA repair protein RecN |
Protein accession | NP_794260 |
Protein GI | 28871641 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTGC ACCTTTCCGT ACACAACTAC GCCATCGTCG AACACCTTGA TCTGGAACTG GATCGAGGCA TGAGCGTTAT TACTGGCGAA ACCGGTGCCG GCAAGTCGAT CATGCTCGAC GCCCTGGGCC TGACTCTGGG CGACCGGGCC GACAGCGGCG TGGTCAGGCC GGGGGCCGAC AAGGCAGACA TCCTTGCCAC GTTCGACCTG GGCGACATTC CCGAGGCCGA GGCCTGGCTC AAAGAGCGCG ACCTCGACAA CGACGGCCCC TGCATCCTGC GCCGGGTGAT TACCGCCGAA GGTCGCTCAC GCTCTTACAT CAATGGCTCG CCCTGCCCTC AGGGAGACTT GAAAGCGCTG GGCGAACTGC TCATCGATAT CCACAGCCAG CATGAACATC AGTCGCTGCT CAAGACCGAC ACCCATCGAC GCCTGCTGGA TGAATACGCT GGCGCGACCG ACCTCGCCCG CCAGGTTCAT CTTGCTGCGC AGCGCTGGCG GCAGACGCGA CAGGAGCTGG AGCGTCTCTC CAACTCCGGC GACGAACAGC GCGCACGCCA TCAATTGCTC AGCTATCAGC TTGAAGAGCT GGAAAGCCTG AGCCTGGGCG AAAACGAGCT GGAGCAGCTC GAACAGGAAC ACAAGGACCT GACCAATGCC GAAAGCCTGC TGAGCATTTG CCGACAGGTC GTCGAGCAAT GTAGCGAAAG CGATTCCGGC AATGTACTCA CAGCCTTGAC CGCCAGCCTG CATCGCCTCG GCAGCGTCGA CCATTCACCT ACGGCCCTGA GCGAGGCCAC AGGCCTGCTG TCCAGCGCGC AGATCCAGGT AGAAGAAGCC GTAGGCGAGC TGAATCGCTT TCTGGATCAT TTCGATGCCG ACCCTGCCCG CCTGCAACAG CTTGAAGAGC GACTCGATGC TATTTATACG CTGGCGCGCA AGCACCGCAT CCAGCCGGGC GAAGTAGCCA CGCTGCAACA AAAGCTGCTG GATGAAATAG AAACACTGAA TGCCAACGAC GAGTCCATCG AGCGTCTGGA GCACGAGGTG CAGGCGTTTG CCCGGCATTA TCAGGAGAAA GCACGCGAAT TGAGCGACCG GCGTCATATG TCAGCGACCA CGCTGGCCAA TGCGGTAGAG CAGGAAATTC ATCGCTTGGG CATGCCGGGC GGACGCTTCC AGATAGACCT CAAACCCAAC GCCAGTGCCG AGCCGCTGCC TCACGGCCTT GAGCAGGTGG AGCTGCTGGT CAGCGCCAAC CCCGGTCAAC CGCTGAAAGC GCTGGCAAAA GTGGCTTCGG GTGGCGAACT GTCACGGATC AGCCTTGCCA TTCAGGTGAT CACCGCACAA ACCTCACGGG TGCCAACACT GGTGTTCGAC GAGGTGGATG TGGGCATCGG CGGCCCGACT GCCGAGATCG TGGGTCAACT GCTGCGTCGC CTGGGCGAGC GCGGGCAGGT CATGACCGTC ACGCACTTGC CGCAGGTCGC GGCGCAGGGC CATCAGCATC TGTTCGTGCA CAAGGTCAGG GATAACGACG CAACGCGCAC GGCGGTCTCC AAACTGACGA AAACCGAGCG CATAGAAGAA GTTGCCCGAA TGCTGGGCGG CATTGACCTC ACCAAGGAAT CCTTGGCACA TGCCAGGAAG ATGGTCGTGA CGGCTAAAAC CTGA
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Protein sequence | MLVHLSVHNY AIVEHLDLEL DRGMSVITGE TGAGKSIMLD ALGLTLGDRA DSGVVRPGAD KADILATFDL GDIPEAEAWL KERDLDNDGP CILRRVITAE GRSRSYINGS PCPQGDLKAL GELLIDIHSQ HEHQSLLKTD THRRLLDEYA GATDLARQVH LAAQRWRQTR QELERLSNSG DEQRARHQLL SYQLEELESL SLGENELEQL EQEHKDLTNA ESLLSICRQV VEQCSESDSG NVLTALTASL HRLGSVDHSP TALSEATGLL SSAQIQVEEA VGELNRFLDH FDADPARLQQ LEERLDAIYT LARKHRIQPG EVATLQQKLL DEIETLNAND ESIERLEHEV QAFARHYQEK ARELSDRRHM SATTLANAVE QEIHRLGMPG GRFQIDLKPN ASAEPLPHGL EQVELLVSAN PGQPLKALAK VASGGELSRI SLAIQVITAQ TSRVPTLVFD EVDVGIGGPT AEIVGQLLRR LGERGQVMTV THLPQVAAQG HQHLFVHKVR DNDATRTAVS KLTKTERIEE VARMLGGIDL TKESLAHARK MVVTAKT
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