Gene PSPTO_4505 details

Gene Information

• Locus tag: PSPTO_4505
• Symbol: dnaK
• ID: 1186188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5075741
• End bp: 5077657
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637395846
• Product: dnaK protein
• Protein accession: NP_794258
• Protein GI: 28871639
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.493452
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAGAA TTATCGGTAT CGACCTGGGG ACTACCAACT CCTGCGTCTC CATTCTGGAA 
AACGGTAACG TCAAGGTTAT CGATAACGCC GAAGGTACGC GTACCACGCC TTCGATCATT 
GCTTATGCCA ACGATGGCGA GATCCTGGTC GGTCAGTCCG CCAAGCGTCA GGCTGTTACC 
AACCCGCACA ACACCCTGTA CGCGGTAAAG CGTCTGATCG GTCGCAAGTT CGACGAGCAA 
GTCGTTCAGA AAGACATCCA GATGGTCCCT TACAAGATCG TCAAGGCTGA CAACGGTGAT 
GCCTGGGTTG AAGTGAATGG CCAGAAAATG GCGCCTCCTC AGATTTCCGC TGAAATCCTG 
AAAAAGATGA AGAAGACTGC CGAAGACTAC CTCGGTGAAG CGGTTACCGA AGCGGTCATC 
ACCGTTCCAG CCTACTTCAA CGACAGTCAG CGTCAGGCGA CCAAGGACGC TGGCCGTATC 
GCCGGTCTGG ACGTCAAGCG CATCATCAAC GAGCCTACCG CAGCCGCTCT GGCATACGGT 
ATGGACAAGG CCAAGGGCGA CCACACTGTC ATCGTTTATG ACCTGGGTGG CGGTACTTTC 
GACGTTTCGG TTATCGAAAT TGCCGAAGTC GATGGCGAGC ATCAGTTCGA AGTGCTGGCC 
ACCAATGGCG ACACGTTCCT GGGCGGTGAA GACTTCGATA TTCGTCTGAT CGACTACTTC 
GTTGACGAAT TCAAGAAAGA AAGCGGCATG AGCCTCAAAG GCGACCCGCT GGCCATGCAG 
CGTCTGAAAG AAGCGGCTGA AAAAGCCAAG ATCGAGCTGT CTTCCAGCAC CCAGACCGAA 
GTCAACCTGC CGTACATCAC TGCAGATGCC ACCGGTCCAA AGCACCTGGT TGTTAAAATC 
TCGCGCTCCA AGCTGGAATC GCTGGTTGAA GACCTGGTTC AGCGCACCAT CGAGCCTTGC 
CGTATCGCAT TGAAAGATGC CGGCATCGAC ATCGGCAAGA TCAACGACGT GATTCTGGTC 
GGTGGCCAGA CGCGTATGCC GCTGGTACAG AAGCTGGTAA CCGAGTTCTT CGGTAAAGAA 
GCGCGTAAAG ACGTCAATCC GGACGAAGCT GTTGCAATGG GTGCAGCTAT TCAGGGCGCG 
GTATTGGCCG GTGATGTAAA AGACGTTCTG CTGCTGGACG TCAGCCCGCT GACGCTGGGT 
ATCGAAACCA TGGGCGGCGT GATGACTGCG CTGATCGAGA AAAACACCAC GATTCCTACC 
AAGAAATCCC AGGTGTTTTC GACTGCCGAT GACAACCAGA ACGCTGTGAC CATTCACGTA 
CTGCAGGGTG AGCGCAAGCA GGCCGGTCAG AACAAGTCGC TGGGCAAGTT CGACCTGGCC 
GAGATTCCAC CCGCTCCACG TGGCGTGCCG CAGATCGAAG TGACCTTCGA CATCGACGCA 
AACGGCATCC TGCACGTTGG CGCGAAAGAC AAGGCTACCG GCAAGCAGCA GTCCATCGTG 
ATCAAGGCCA ACTCCGGTCT GTCCGAGGAA GAAATTCAGC AGATGGTTCG CGATGCTGAA 
GTCAACTCCG AAGAAGATCG CAAGTTCGAA GAGCTGGCCT CTGCCCGTAA CCAGGGTGAT 
GCGTTGGTCC ACTCGACTCG CAAGATGATT GCTGACGCAG GCGACAAGGT CACTGCTGAA 
GAGAAGACGG CTGTTGAAGC GGCGCTGGTT GCTCTGGAAG CGGCCATCAA GGGCGACGAC 
AAGGCTGTCA TTGAAGCCAA GGTCGAAGAA CTGTCTAAGG TTTCCGCGCC GATCGCTCAG 
AAGATGTACG CCGAGCAGGC CGAGAATCCG GAAGCAGCAG CCAAGCCGGC TGAAGAAACT 
GCCAAGGCTG ACGACGTCGT TGACGCCGAG TTTGAAGAAG TGAAAGACCA CAAGTAA 

 

Protein sequence

MGRIIGIDLG TTNSCVSILE NGNVKVIDNA EGTRTTPSII AYANDGEILV GQSAKRQAVT 
NPHNTLYAVK RLIGRKFDEQ VVQKDIQMVP YKIVKADNGD AWVEVNGQKM APPQISAEIL 
KKMKKTAEDY LGEAVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG 
MDKAKGDHTV IVYDLGGGTF DVSVIEIAEV DGEHQFEVLA TNGDTFLGGE DFDIRLIDYF 
VDEFKKESGM SLKGDPLAMQ RLKEAAEKAK IELSSSTQTE VNLPYITADA TGPKHLVVKI 
SRSKLESLVE DLVQRTIEPC RIALKDAGID IGKINDVILV GGQTRMPLVQ KLVTEFFGKE 
ARKDVNPDEA VAMGAAIQGA VLAGDVKDVL LLDVSPLTLG IETMGGVMTA LIEKNTTIPT 
KKSQVFSTAD DNQNAVTIHV LQGERKQAGQ NKSLGKFDLA EIPPAPRGVP QIEVTFDIDA 
NGILHVGAKD KATGKQQSIV IKANSGLSEE EIQQMVRDAE VNSEEDRKFE ELASARNQGD 
ALVHSTRKMI ADAGDKVTAE EKTAVEAALV ALEAAIKGDD KAVIEAKVEE LSKVSAPIAQ 
KMYAEQAENP EAAAKPAEET AKADDVVDAE FEEVKDHK