Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4487 |
Symbol | rpsO |
ID | 1186168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5054683 |
End bp | 5054952 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637395827 |
Product | ribosomal protein S15 |
Protein accession | NP_794241 |
Protein GI | 28871622 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCA GCGTTGAAGA AAAAGCTCAG ATCGTAACCG ACTACCAGCA AGCTGTTGGT GATACTGGTT CGCCAGAAGT GCAGGTTGCA CTGCTTACCG CCAACATCAA CAAACTGCAA GGCCACTTCA AGGCCAACGG TAAGGACCAC CACTCCCGTC GTGGTCTGAT CCGTATGGTA AACCAGCGCC GCAAGCTGCT GGATTACCTG AAAGGTAAGG ACGTTAGCCG TTACAGCGCC CTGATCGGTC GTCTGGGTCT GCGTCGCTAA
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Protein sequence | MALSVEEKAQ IVTDYQQAVG DTGSPEVQVA LLTANINKLQ GHFKANGKDH HSRRGLIRMV NQRRKLLDYL KGKDVSRYSA LIGRLGLRR
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