| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4475 |
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| Symbol | gatB |
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| ID | 1186156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5039359 |
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| End bp | 5040804 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395815 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | NP_794229 |
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| Protein GI | 28871610 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATGGG AAGTCGTCAT CGGGCTTGAG ATTCACACTC AGCTTTCGAC CCAATCAAAG
ATTTTTTCCG GCAGCGCCAC CACGTTCGGC TCCGAGCCCA ACACCCAGGC CTGCCTTGTC
GATCTGGGCA TGCCGGGCGT GCTGCCAGTG CTGAACAAGG AAGCCGTGCG CATGGCCGTC
AAGTTCGGCC TGGCGGTAGA TGCCGAAATC GGTCAGCACA ACGTGTTCGC CCGCAAAAAC
TATTTTTACC CGGACCTGCC CAAGGGCTAT CAGATCAGCC AGATGGAGCT GCCGATTGTC
GGCAAGGGCC ACCTGGACAT TCCCCTGGAG GACGGCACGG TCAAACGCGT CGGCATCACT
CGCGCGCACC TTGAAGAAGA CGCTGGCAAA AGTCTGCATG AAGACTTCCA GGGCATGACC
GGGATCGACC TGAACCGTGC CGGCACGCCG CTGCTGGAGA TCGTTTCCGA GCCGGACATG
CGCAGCGCAA AAGAAGCCGT GGCCTACGTC AAGGCCATCC ACGCGATCGT TCGCTACCTG
GGTATCTGCG ACGGCAACAT GGCCGAGGGC TCGCTGCGTT GCGACTGCAA CGTGTCGATC
CGCCCCAAGG GCCAGGTCGA GTTCGGTACT CGCTGCGAGA TCAAGAACGT CAACTCGTTT
CGCTTCATCG AAAAAGCGAT CAACAGCGAG ATTCAGCGCC AGATCGACCT GATCGAAGAC
GGCGGCAAGG TTATCCAGCA GACACGTCTG TACGACCCGA ACACCAACGA AACCCGCGCC
ATGCGCAGCA AGGAAGAAGC CAACGACTAC CGTTACTTCC CTGACCCAGA CCTGTTGCCG
GTGATCATCG AAGACTCGTT CATCGAAGAA ACCCGCGCCA CACTGCCGGA ACTGCCACCG
CAGAAACGCG AACGCTTCCA GAGCCAGTTC GGCCTGTCGA CGTACGACGC CAGCGTGCTG
GCCTCCAGCC GCGAGCAGGC CGACTACTTT GAAAAAGTGG TCAGCATCAG CGGCGACGCC
AAGCTGGCCG CCAACTGGGT CATGGTCGAA CTGGGCAGCC TGTTGAACAA ACAGGGGGTC
GAAATCGACC AGTCGCCGGT CAGCGCCGAA CAACTGGGCG GCATGCTCAA GCGCATCACT
GACAACACCA TTTCGGGCAA GATCGCCAAA ATGGTTTTTG AAGCGATGGC CAATGGTGAA
GGCAGCGCCG ATGAAGTGAT CGAGAAGCGC GGCCTGAAAC AGGTGACCGA CAGCGGTGCC
ATCGAATCGA TGCTCGACGA AGTACTGGCT GCCAACGCAG AACAGGTCGA ACAGTACCGT
GCAGCTGATG AAGCCAAGCG CGGCAAGATG TTCGGTTTCT TCGTCGGCCA GGCCATGAAA
GCCTCCAAAG GCAAGGCCAA CCCACAGCAG GTCAACGAAC TGCTGAAGGC CAAACTGGAG
GGTTAA
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| Protein sequence | MQWEVVIGLE IHTQLSTQSK IFSGSATTFG SEPNTQACLV DLGMPGVLPV LNKEAVRMAV
KFGLAVDAEI GQHNVFARKN YFYPDLPKGY QISQMELPIV GKGHLDIPLE DGTVKRVGIT
RAHLEEDAGK SLHEDFQGMT GIDLNRAGTP LLEIVSEPDM RSAKEAVAYV KAIHAIVRYL
GICDGNMAEG SLRCDCNVSI RPKGQVEFGT RCEIKNVNSF RFIEKAINSE IQRQIDLIED
GGKVIQQTRL YDPNTNETRA MRSKEEANDY RYFPDPDLLP VIIEDSFIEE TRATLPELPP
QKRERFQSQF GLSTYDASVL ASSREQADYF EKVVSISGDA KLAANWVMVE LGSLLNKQGV
EIDQSPVSAE QLGGMLKRIT DNTISGKIAK MVFEAMANGE GSADEVIEKR GLKQVTDSGA
IESMLDEVLA ANAEQVEQYR AADEAKRGKM FGFFVGQAMK ASKGKANPQQ VNELLKAKLE
G
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