| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4454 |
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| Symbol | yfiA |
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| ID | 1186135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5018797 |
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| End bp | 5019105 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637395794 |
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| Product | ribosomal subunit interface protein |
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| Protein accession | NP_794208 |
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| Protein GI | 28871589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.948923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGTCA ACATCAGTGG ACACCAACTG GAAGTGACCA AACCCCTTCG CGAATACGTT
GAGCTCAAGC TCAAGAAGCT CGAGGGGCAC TTTGACAAGA TTACAAACGT GCAGGTCACG
ATGGCGGTCG AAAAGCTCAA GCAGAAGATC GAAGCCACGC TGCATATCCA CGGTGGGGAG
GTAGTTGCCA ATGCTGAACA TGACGACATG TATGCTGCCA TCGACCTGCT CACTGACAAG
CTCGACAGAC AATTGCTCAA GCATAAGGAA AAGCAGCAAA GCATCCTCAA AGGTGCGGCC
GCTCGCTAA
|
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| Protein sequence | MQVNISGHQL EVTKPLREYV ELKLKKLEGH FDKITNVQVT MAVEKLKQKI EATLHIHGGE
VVANAEHDDM YAAIDLLTDK LDRQLLKHKE KQQSILKGAA AR
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