Gene PSPTO_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4450 
Symbol 
ID1186131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5015213 
End bp5015785 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content54% 
IMG OID637395790 
Producthypothetical protein 
Protein accessionNP_794204 
Protein GI28871585 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0612162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACTA AAAAAATTCG GAAGTTCCTG CTTTTCGGGG TACTGGCGGT GCTGCTGGCG 
GCCGTCGGCT ATTGGAACAT CAGCCCGGAA AGTTTTATGG ATAGACCCAT TTCATCCGTT
GACGACACGG TCATCGACTA CTATGCGATC AACACGCGCA GCGTGCAGTA TCTGCCGGAC
GGCACACTTC AGTACGACAT GACTGCCGAT AAGGTAGAGC ATGTGATGGC CACAGACGTG
AGCCTGCTGA CCACCCCCAA CCTGCACATG TACCGTGGCG GCGAGTTCCC CTGGCACGTG
ACAAGCAAAA GAGGCGAAGT TTCGTCTGCG GGTGACCAGG TTGAGCTGAT CGACGATGTT
CGCGTCGAAC GCACCGATGA GAAACAACGC ACAACTATCA TTACCAGCAG CCGCATGACT
GTATTCCCGC AGAAGGAATA TGCGCAGACC GACCAAGACG TTAGAATCGA CGGCGCGGGC
GGTGTCACTA CGGCCAAGGG AATGAAAGCG TATTTGAAAG ACAGCAGGAT GGACCTGCTG
TCCAACGTAA GAGGACAGTA TGAGGCTCGT TAA
 
Protein sequence
MFTKKIRKFL LFGVLAVLLA AVGYWNISPE SFMDRPISSV DDTVIDYYAI NTRSVQYLPD 
GTLQYDMTAD KVEHVMATDV SLLTTPNLHM YRGGEFPWHV TSKRGEVSSA GDQVELIDDV
RVERTDEKQR TTIITSSRMT VFPQKEYAQT DQDVRIDGAG GVTTAKGMKA YLKDSRMDLL
SNVRGQYEAR