Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4450 |
Symbol | |
ID | 1186131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5015213 |
End bp | 5015785 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637395790 |
Product | hypothetical protein |
Protein accession | NP_794204 |
Protein GI | 28871585 |
COG category | [S] Function unknown |
COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0612162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACTA AAAAAATTCG GAAGTTCCTG CTTTTCGGGG TACTGGCGGT GCTGCTGGCG GCCGTCGGCT ATTGGAACAT CAGCCCGGAA AGTTTTATGG ATAGACCCAT TTCATCCGTT GACGACACGG TCATCGACTA CTATGCGATC AACACGCGCA GCGTGCAGTA TCTGCCGGAC GGCACACTTC AGTACGACAT GACTGCCGAT AAGGTAGAGC ATGTGATGGC CACAGACGTG AGCCTGCTGA CCACCCCCAA CCTGCACATG TACCGTGGCG GCGAGTTCCC CTGGCACGTG ACAAGCAAAA GAGGCGAAGT TTCGTCTGCG GGTGACCAGG TTGAGCTGAT CGACGATGTT CGCGTCGAAC GCACCGATGA GAAACAACGC ACAACTATCA TTACCAGCAG CCGCATGACT GTATTCCCGC AGAAGGAATA TGCGCAGACC GACCAAGACG TTAGAATCGA CGGCGCGGGC GGTGTCACTA CGGCCAAGGG AATGAAAGCG TATTTGAAAG ACAGCAGGAT GGACCTGCTG TCCAACGTAA GAGGACAGTA TGAGGCTCGT TAA
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Protein sequence | MFTKKIRKFL LFGVLAVLLA AVGYWNISPE SFMDRPISSV DDTVIDYYAI NTRSVQYLPD GTLQYDMTAD KVEHVMATDV SLLTTPNLHM YRGGEFPWHV TSKRGEVSSA GDQVELIDDV RVERTDEKQR TTIITSSRMT VFPQKEYAQT DQDVRIDGAG GVTTAKGMKA YLKDSRMDLL SNVRGQYEAR
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