| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4436 |
|---|
| Symbol | |
|---|
| ID | 1186117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5004167 |
|---|
| End bp | 5004619 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637395776 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794190 |
|---|
| Protein GI | 28871571 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3011] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.065314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTA ACACCCCTCA GCCCAACCCC GCGCCTTTCC TGAAAGCGGG TGAAACAGTG
GTGCTGTTCG ATGGCGTCTG CAAATTATGC AACGGCTGGG CAAAATTCAT TATTCGCCAT
GACCGCAGGC AGCGGATACG CCTGGCTACT GTGCAATCGC CGGAGGGCCA GGCGCTGCTG
GAATGGGCGG GCCTTCCACT GGATCGTTTT GACACAATGG CGGCCGTCAC TGGGGATCGG
CTCTATGTTC GCTCCGAGGC CTTCTTTGTC GCCCTGTCGG ATTTTCCTGC GCCTTGGCGC
TGGCTGAGGG TGTTGCGCTT CTTCCCGGCG GTTATACGCG ACTGGCTGTA CGACAGAATC
GCATTGAATC GATACCGGCT ATTTGGCCGT TATGATTCCT GCCTGCTGCC AACCCCCGAT
CACGAGCGAC GCTTTCTGAA AGCCAGCCCG TGA
|
|---|
| Protein sequence | MQSNTPQPNP APFLKAGETV VLFDGVCKLC NGWAKFIIRH DRRQRIRLAT VQSPEGQALL
EWAGLPLDRF DTMAAVTGDR LYVRSEAFFV ALSDFPAPWR WLRVLRFFPA VIRDWLYDRI
ALNRYRLFGR YDSCLLPTPD HERRFLKASP
|
|---|
| |