| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4431 |
|---|
| Symbol | |
|---|
| ID | 1186112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4998559 |
|---|
| End bp | 4999002 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637395771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794185 |
|---|
| Protein GI | 28871566 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3105] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0156474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACACT CGCTCTTAGT CTGGTTGTTG CCGACGCTCG CCCTGGTGGC CGGTGTCGTC
ATTGGTTTTC TGGTGGCACG TTTGCTGCCC AACACCGTTC CGAACAGCAC TCAGCGCCAG
CTGGATGACA TTCAGGAGCG TTTCGACACC TATCAGAACG AGGTAGTCAC TCACTTCAAC
AGCACGGCTA ATCTGGTACA GAAGCTTTCG CAAAGCTATC AGGACGTTCA GGAGCACCTT
GCAGAAGGCG CCAACCGTCT GGCACTCGAT GACCTGACCC GCCAGCGTCT GCTGGCCGCG
CTGCACCCGG AGGCCAATCA GGCACACCGC GACCATCGTG ATCGCCTGAC CCCGCCGCGC
GACACCGAAA CACCCAAGGA CTACGCCCCC AAGTCGCCTA ATACCCCAGG CATGCTCGAT
GAGCACTACG GCTTGAAAAA GTAA
|
|---|
| Protein sequence | MEHSLLVWLL PTLALVAGVV IGFLVARLLP NTVPNSTQRQ LDDIQERFDT YQNEVVTHFN
STANLVQKLS QSYQDVQEHL AEGANRLALD DLTRQRLLAA LHPEANQAHR DHRDRLTPPR
DTETPKDYAP KSPNTPGMLD EHYGLKK
|
|---|
| |