Gene PSPTO_4426 details

Gene Information

• Locus tag: PSPTO_4426
• Symbol: rplM
• ID: 1186107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4993329
• End bp: 4993757
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637395766
• Product: ribosomal protein L13
• Protein accession: NP_794180
• Protein GI: 28871561
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.145375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTT TTACTGCTAA ACCGGAAACA GTTAAGCGCG ACTGGTTCGT CGTCGACGCT 
GCTGGTCAGA CCCTGGGTCG TCTGGCCACC GAAATCGCGA GCCGTCTGCG TGGCAAGCAC 
AAACCGGAAT ACACTCCGCA CGTTGACACC GGCGACTACA TCGTCGTGAT CAATGCCGAG 
CAGATCCGCG TTACTGGTGC CAAGACCACC GACAAGATCT ACTACTCACA CTCCGGTTTT 
CCGGGCGGGA TCAAGTCGAT CAACTTCGAA AAGCTGATCG CCAAAGCTCC TGAGCGCGTG 
ATCGAGACCG CGGTCAAAGG CATGCTGCCT AAGAACCCGC TGGGTCGCGA CATGTATCGT 
AAGCTGAAAG TCTATGCGGG CGCTGTACAC CCTCATACTG CTCAGCAGCC CCTAGAACTG 
AAGTTTTAA 

 

Protein sequence

MKTFTAKPET VKRDWFVVDA AGQTLGRLAT EIASRLRGKH KPEYTPHVDT GDYIVVINAE 
QIRVTGAKTT DKIYYSHSGF PGGIKSINFE KLIAKAPERV IETAVKGMLP KNPLGRDMYR 
KLKVYAGAVH PHTAQQPLEL KF