Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4424 |
Symbol | sspA |
ID | 1186105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4992024 |
End bp | 4992641 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395764 |
Product | stringent starvation protein A |
Protein accession | NP_794178 |
Protein GI | 28871559 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.339627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTGA CCAACCGGTT GGCCTGTTAC TCCGACCCCG CCGACCACTA TTCCCATCGC GTGCGCATCG TGCTCGCGGA GAAAGGTGTC AGCGCCGAGA TCATTGAGGT TGTGGCGGGT CGTCATCCGC CGCAGCTTAT CGAAGTCAAT CCGTATGGCA GCGTGCCTAC CCTGGTCGAT CGCGACCTGG CCTTGTACGA GTCCACGGTG GTGATGGAAT ACCTGGATGA GCGTTATCCG CATCCGCCCT TATTGCCTGT CTATCCAGTC ACCCGTGCCA ACAGCCGTCT GCTGATCCAT CGGATCCAGC GTGACTGGTG TGGCCTTGTG GACCTGATTC TGGATACTCG CAGTAAAGAG CCTGCCCGTG TTCAGGCGCG CAAGGAGCTG CGTGAAAGCC TGACCGGGGT TTCGCCGTTG TTCGCGGAAA AAGCTTTTTT CATGAGCGAC GAGCTAAGTC TTGTTGACTG CTGTCTACTC CCAATACTCT GGCGTTTGCC GATTTTGGGT ATTGAATTGC CGCGGCCTGC CAAGCCGTTG CTTGATTATA TGGAGCGTCA ATTTGCGCGT GAGGCTTTTC AGGCAAGTCT GTCTGCCGCC GAACGTGAAA TGCGCTAA
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Protein sequence | MGVTNRLACY SDPADHYSHR VRIVLAEKGV SAEIIEVVAG RHPPQLIEVN PYGSVPTLVD RDLALYESTV VMEYLDERYP HPPLLPVYPV TRANSRLLIH RIQRDWCGLV DLILDTRSKE PARVQARKEL RESLTGVSPL FAEKAFFMSD ELSLVDCCLL PILWRLPILG IELPRPAKPL LDYMERQFAR EAFQASLSAA EREMR
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