| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4413 |
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| Symbol | murE |
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| ID | 1186094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4981218 |
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| End bp | 4982681 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395753 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | NP_794167 |
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| Protein GI | 28871548 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0723673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTA ATCTCAGCAA GATTTTCGCT CATACCGACC GCGATCCCTT GATCCGCGAG
TTGACACTCG ACAGCCGCAA TGTTCGTCCA GGTGACCTGT TTCTGGCTGT GCCGGGTATC
AAGGTCGATG GTCGCGCGCA CATTGCCGAC GCACTCAAGC GCGGCGCAGC AGCGGTGGCC
TACGAGGTCG AAGGTGCAAC GGTTCTGCCG ATCACCGACG TGCCGCTGAT TCCGGTCAAA
GGGCTGGCAG CGCAGTTGTC CGACGTTGCC GGTCGCTTCT ACGGCGACCC GAGCCGCAGC
CTGAATCTGG TGGGCGTCAC CGGCACCAAC GGCAAGACCA GCGTCACCCA GCTGGTTGCT
CAGGCGCTCG ACGCGCTGGG TCAACGCTGC GGCATCGTCG GCACCCTCGG CACCGGCTTT
TACGGCGCAC TGCAAAGCGG CCGTCATACC ACTCCTGATC CCATTGCCGT TCAGGCAGCG
CTGACCGACC TGAGAAAGGC GGGCGCGCGC GCCGTGGCTA TGGAAGTGTC GTCCCACGGT
CTGGATCAAG GCAGGGCTAC GGCGCTGGCG TTCGACGTGG CAGTGCTGAC CAATCTGTCT
CGTGATCACC TGGATTATCA CGGCACCATG GAAGCTTACG CGGCAGCCAA GGCCAAGCTG
TTCGCGTGGC CGAATCTGAA CTGCCGGGTG ATCAATCTGG ATGACGATTT TGGTCGCGAA
CTGGCTGGCC TCAAGCAAGA ATCGCGGTTG ATCACCTACA GCCAGCTGGA TAGCTCGGCT
TACCTGTACT GCCGCGACGC GAAATTTGAT GACGATGGCG TGCGCGCCAC ACTGGTCACG
CCTCAGGGCG AGCATTTCCT GCGCAGCAGC CTGCTGGGGC GCTTCAACCT GAGCAACGTG
CTGGCAGCGG TCGGCGCACT GCTGGGGCTG GACTACGCGC TGGACGAAAT TCTCAAGGTA
CTGCCCAAAC TCGAAGGGCC GGTCGGCCGC ATGCAGCGTC TGGGCGGCGC CGACAAGCCT
CTGGTGGTCG TGGATTACGC GCACACCCCG GACGCGCTGG AAAAAGTGCT TGAAGCACTG
CGTCCGCACG CCAAAGGCCG CCTGTTGTGC CTGTTCGGCT GCGGCGGTGA TCGCGATCGC
GGCAAACGCC CGTTGATGGC TGAAGTTGTC GAAAGACTGG CTGACGGCGT CTGGGTTACT
GATGACAACC CGCGCTCCGA GGCACCGACC AACATTTTTG ACGACATTCG TCCAGGTTTC
GTAACGGCCG ACAAAGTGCG CTTCATCGAA GGTCGTGGTC AGGCCATTGC CGAGCTGATC
GCCAGCGCAA CTGTCGATGA CGTGGTGGTG CTGGCGGGCA AAGGCCACGA GGACTATCAG
GAAATCGACG GCAAGCGCCA GCCGTTTTCC GATCTGGAAG AAGCCGCCAC GGCGCTTGCC
GCATGGGGGC CTGAGAATGA TTAA
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| Protein sequence | MAFNLSKIFA HTDRDPLIRE LTLDSRNVRP GDLFLAVPGI KVDGRAHIAD ALKRGAAAVA
YEVEGATVLP ITDVPLIPVK GLAAQLSDVA GRFYGDPSRS LNLVGVTGTN GKTSVTQLVA
QALDALGQRC GIVGTLGTGF YGALQSGRHT TPDPIAVQAA LTDLRKAGAR AVAMEVSSHG
LDQGRATALA FDVAVLTNLS RDHLDYHGTM EAYAAAKAKL FAWPNLNCRV INLDDDFGRE
LAGLKQESRL ITYSQLDSSA YLYCRDAKFD DDGVRATLVT PQGEHFLRSS LLGRFNLSNV
LAAVGALLGL DYALDEILKV LPKLEGPVGR MQRLGGADKP LVVVDYAHTP DALEKVLEAL
RPHAKGRLLC LFGCGGDRDR GKRPLMAEVV ERLADGVWVT DDNPRSEAPT NIFDDIRPGF
VTADKVRFIE GRGQAIAELI ASATVDDVVV LAGKGHEDYQ EIDGKRQPFS DLEEAATALA
AWGPEND
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