| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4412 |
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| Symbol | murF |
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| ID | 1186093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4979855 |
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| End bp | 4981225 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395752 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | NP_794166 |
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| Protein GI | 28871547 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.140026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC CGATGACATT CAGCGAACTG ACCGTACCGC TCGACGCGCG TCTGGTCGGC
GGCGATTGCA GCTTTGACGG TGTGAGCACC GACAGCCGTG GCATCGCGCC GGGGCAATTG
TTCGTGGCCC TGACCGGCCC GCGCTTCGAC GGCCATGAGT ACCTCGACCA GGTCGCAGCC
AAAGGCGCAG TCGGTGCCCT GGTCGAGCAC GAAGTGGAGG GCGCTGCCTT GCCACAACTG
GTGGTACTCG ATACTCGCAA GGCGCTCGCG CAACTGGGTG CGATGAACCG CAACGGGTTT
GTCGACAGGC CTGTCGCCGC CGTCACCGGC TCCAGCGGCA AAACCACTGT CAAGGAAATG
CTCGCGAGCA TCCTGCGCAC GCGCGGCCCT GTATTGGCAA CGCGCGGCAA TTTGAATAAC
GAACTGGGCG TTCCGCTGAC CCTGCTGGAG CTGGCGCCGG AATACACCTC TGCCGTCATT
GAGTTAGGCG CTTCACGGGT CGGCGAGATT GCCTACACCG TGAGTCTGAC CAAGCCGCAT
GTGGTCATTA TTACCAATGC CGGAACCGCC CATGTCGGCG AGTTTGGTGG CCCCGAGCGA
ATCGTCGAGG CCAAGGGCGA GATTCTTGAA GGCGTCGAAG CCAGCGGCAC AGCCGTGTTG
AATCTGGAAG ACAAGGCATT CCCGATCTGG CGCAAGCGCG CCGGTCACCG CAACATTCTG
ACCTTCGCGC TGGCTGATGC GGCGGCTGAT TTCCATGCCG GCGAGCTGAG CCGTGATGCG
CGAGGCTGCC CGAGCTTCAC CATGGCCAGC CCGCTCGGCA GCGCGCAGGT ACAGCTGAAT
CTGCTGGGCA CGCACAACGT GACCAACGCC TTGGCCGCTG CCGCTGCCGC CTGCGCACTG
GGCGTGAGCC TGGAGGGCAT CGTTGCCGGC CTGAACAACG TGCAGCCGGT CAAAGGTCGC
GCTGTCGCGC AAATCGCCAG CAACGGTGTG CGCGTCATCG ATGACACCTA CAACGCCAAC
CCTGGGTCGA TCAACGCTGC CGTCGACATC CTTACCGGTT TTACCGGCCG TACCGTGCTG
GTGCTGGGCG ATATCGGCGA GCTGGGCGAA TGGGCCGAGC AGGGGCATCA CGACGTGGGC
GCCTATGCCG CTGGCAAGGT GTCGGCGCTG TATGCGGTCG GCCCACTCAT GACACACGCC
GTCAGTGCCT TCGGTGAACA TGCCTACCAC TTTGCCAGTC AGGCAGAGCT GATTGCGGCG
CTGGGCGCCG AGCAAGACCC CAATACCACT TTACTGATCA AGGGCTCGCG TAGCGCTGCG
ATGGAAAACG TCGTGGCTGC CTTGTGCGGT TCTAGCCTGG AGAAACATTA A
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| Protein sequence | MIKPMTFSEL TVPLDARLVG GDCSFDGVST DSRGIAPGQL FVALTGPRFD GHEYLDQVAA
KGAVGALVEH EVEGAALPQL VVLDTRKALA QLGAMNRNGF VDRPVAAVTG SSGKTTVKEM
LASILRTRGP VLATRGNLNN ELGVPLTLLE LAPEYTSAVI ELGASRVGEI AYTVSLTKPH
VVIITNAGTA HVGEFGGPER IVEAKGEILE GVEASGTAVL NLEDKAFPIW RKRAGHRNIL
TFALADAAAD FHAGELSRDA RGCPSFTMAS PLGSAQVQLN LLGTHNVTNA LAAAAAACAL
GVSLEGIVAG LNNVQPVKGR AVAQIASNGV RVIDDTYNAN PGSINAAVDI LTGFTGRTVL
VLGDIGELGE WAEQGHHDVG AYAAGKVSAL YAVGPLMTHA VSAFGEHAYH FASQAELIAA
LGAEQDPNTT LLIKGSRSAA MENVVAALCG SSLEKH
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