Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4360 |
Symbol | |
ID | 1186041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4922149 |
End bp | 4923069 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395701 |
Product | dehydrogenase, putative |
Protein accession | NP_794115 |
Protein GI | 28871496 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGC GGATCAATGG CCGTCGTGCC GAGGGTGTCG AGCATCTGGT CAGGCGCGGT GCCGAATTCA TTCAGGGCGA CCTCGCAGAC CCTTATCTGG TTCGGGCGTT ATGCGATGAC GTGGAGGCCG TGGTGCATTG CGCAGGCTCG GTCGGGGTAT GGGGGCGTCG CCAGGATTTC ATGCAGGGCA ACGTGCAGCT CACGGAAAAC ATCGTCGAGG GCTGCCTGAA ACAAAGAGTA CGCAGGCTGG TCCATCTTTC GTCACCCTCG ATCTATTTTG ATGGCCGCTC GCACTTGGGC ATCAAGGAAG AGCAGGTGCC CAAGCGCTTT CATAATCACT ATGCGGCCAC CAAGTACCTG GCCGAACAGA AGGTGTTCGG TGCCGAGGAG TTCGGGCTTG AGGTGATTGC CCTGCGGCCG CGTTTCGTGA CCGGGGCAGG TGATAACAGT ATTTTCCCGC GGCTGTTGCA CATGCAGCGC AAAAAGCGCC TGTCCATCGT CGGCAACGGC CTGAATGTGG TGGATTTCAC CAGCATGCAG AATCTCAACG AAGCACTGTT GAGCAGTTTG CTGGCAACCG GTTCGGCCTT GGGCAAGGCC TACAACATCA GCAACGTCAC GCCGGTCCCG TTGTGGGACG CCATCAATTA TGTGATGCGG CAGATGCACT TGCCGCAGGT CACCCGTTAT CGTTCCTACG GGCTGGCCTA CAGCGCGGCG GCGATCAACG AAGGTGCCTG TATGCTGTGG CCGGGCCGAC CTGAACCTAC CCTGTCACGA TTGGGCATGC AGGTCATGAA CAAGGACTTC ACGCTTGATA TCAGCCGTGC CAGGCATTAT CTGGATTATC AGCCGCAGGT CAGCCTGTGG ACGGCGCTGG ATGAGTTCTG TGGCTGGTGG CAGGCACAGC ACGCAATCTG A
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Protein sequence | MSVRINGRRA EGVEHLVRRG AEFIQGDLAD PYLVRALCDD VEAVVHCAGS VGVWGRRQDF MQGNVQLTEN IVEGCLKQRV RRLVHLSSPS IYFDGRSHLG IKEEQVPKRF HNHYAATKYL AEQKVFGAEE FGLEVIALRP RFVTGAGDNS IFPRLLHMQR KKRLSIVGNG LNVVDFTSMQ NLNEALLSSL LATGSALGKA YNISNVTPVP LWDAINYVMR QMHLPQVTRY RSYGLAYSAA AINEGACMLW PGRPEPTLSR LGMQVMNKDF TLDISRARHY LDYQPQVSLW TALDEFCGWW QAQHAI
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