| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4344 |
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| Symbol | |
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| ID | 1186025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4906645 |
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| End bp | 4909305 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395685 |
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| Product | insecticidal toxin protein, putative |
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| Protein accession | NP_794099 |
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| Protein GI | 28871480 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATA GCGCGGTACA TTCCCACACG CCGGAACTGC TCGTTTCCGA GGTTCGTGGG
CTGGTCGTGC GCCAGGTCCT CTTACATCGA ACCGAAGCCG CGGAAGCCGC CGCAATGCGG
GTTACCCGGC AGCGTTTCGA CCTGGCAGGC AGAATGATCG CCGCCACTGA TCCACGTCTG
GCCAGCGCCA ACCGGAGCAC TGTCTACAGC CTTGGCGGCA ACACGTTGGC CACCGAGAGT
GTCGATGCCG GCTGGCGAGT TGCGCTGTTC GGCGAGGCTG GCCAGGTCTT GAATGGCTGG
GACGCTCGCG GTAACGAGCG GCAGTTAGAG TACGACCTGC TGTTACGCCT GAGAAACATC
ATCGAACAAA ATCGCTGCGC GGAGCGGTTC GCCTATGGCC AGACAGATGC GGCAGGACAC
AACCAGTGCA ATCAACTGGT CCGCCATGAC GATACGGCGG GCTCGCGCTT GCTGCAGGAT
TACAGCCTGC ATGGCTCGGT ACTCAGTGAA ACACGACATT TCATGCTTGC CGCAGAAGCA
GCGGACTGGC CATCAGCCGA GCCTGATCGT AATGAGCTGG TGGAGCCGGC CGGCCTTCAG
ACCTGTCGCG TTTTCAACGC ACAAGGTGAA GTGCTGAAGC AGACCGATGC CAGTGGTAAT
AGCCAGCTTT CGACTCATAA TCTGGCCGGT CAGCTGCACA GCACAGACCT GATATTGAAC
GACAGCATGC ACGCGCGGAA GCTGGTCAGC GCGATTCGCT ATAACGCCTT CAACCAGGTC
GAACAGGAAA CAGCGGGCAA TGGCGTAGTC AGCCTTTACG CCTATGATCA GCAGGACGGC
AGGCTGATCG GGCTGAGCGC GATCTCTGCT GACGGCACGC TGCTGCAGCA ACTCAATTAC
AGCTATGACC CGGTGGGCAA TATCCTGCTC GTCAACGATG CCTCGCAACC AGACCGGTAT
TGCGACAACC AGCTTATCGA ACCGATCAGC CGTTACCGTT ACGACACTGT GTATAAGTTG
ATTGAAGCCA CTGGCCGGGA GGTCAGAAAC GGTGCCAGCC ATGGTCCGGC GCTGCCCGGT
CTGCAACCTC TGCCGACGCT CGATCCTTGC CAGGTCAGCA ACTACAAACA GAATTACAGC
TACGACACTG CAGGCAATCT GCTGCAAATG CGCCACGAAG GCGCACACAA CTTCACCCGC
AACATGCACG TTGCCCCGGA CAGCAATCGC AGCCTGCCCG ACGATGACGG AGACGTGGAT
TTCGCTACGA GTTTTGATGC CAACGGCAAT CTGCTGCAAC TGGTTCGCGG GCAGGTTATG
GGCTGGGATG CGCGTAATCA GTTGCAGCAC ATCACCACTG TGCAACGTGA AGACGGGTCG
AACGATGACG AACGCTATGT CTATGACGGC CAGGGTCAAC GTTGTCGCCT GATCAGTACT
GCTCAGGCAT CAGGTCGCAC ACTGATCAAT GAAGTGCGCT ACCTGCCGGG GCTGGAAATT
CGTACTACGG CCGATGGCGA AATCCTTCAT GTCGTTACAA CTCAGGCGGG TCGCAACAGT
GTGCGGGTGT TGCACTGGGA GGCTGGAAAA CCGGATTCTA TTGCGAACGA TCAGGTGCGT
TACAGCCTGG GTGATCATCT GGGCTCAAGC ACGCTGGAGC TTGATCAGCA AGGCGGTCTG
ATCAGCCAGG AAAATTATTA CCCCTTTGGT GGCACGGCCT GGTGGGCGGC GCGCAGTGCG
GTGGAAGCGA AGTACAAGAC AGTGCGTTAC TCGGGTAAGG AGCGCGATGC GAGCGGGCTT
TATTATTACG GGTTCAGGTA TTACGCGCCG TGGCTGCAGC GGTGGATCAA TCCGGATCCG
GCGGGGGATG TGGATGGGTT GAACGCCTAT AATTTCGTAT CGAACAACCC CGTCATGTTA
ATAGACAAAG ATGGGAGAGT AGGCGAGCGA ATCGCCGCAG CATACGCACC AAACGAACCC
GCCCTTCCTT CATACTTTAA AGACACCTAC TTATCCGAAG CCTCTAACGA TCAAGTGACT
GCGGACGCCA GAGCCGGAGC GCTGTGGAAT GACCCTCCCA GGTTCCTGGG AGCAGGGTAC
GCATACGCAC CTGCCTGGTA CTACAATGCC AACCTGCAGC AGCGTATAGA CTTGTTGAAT
GAGCGCTCAT GGATGAGCCA CGGCATCGTT ACAACACTAT TCAATCATGA TCATGACACT
GTCAAAAAAC CCTACGAAAT AACATCCAGA CACTGGAATA ACGTTGATGA ATTCACGAAC
ACTTACACAC CCGAAAAGTG GATGATTCAA TCCAATTTTA AAGCCAGCAA ATCGAATGAC
TACCATGCGA GCGATGTTAT TCGATATCAA TATGAGACCG TGTCAAAATC ATTGGGTTTC
TTTGGAGTGT TACCTTCCCT TGTAGAAAAC CAATACGTTA TGAACACAAA AACCCTCAGC
ATCACCTCTG GGCTTGAATC CAGCACTCCT CACCTGTTAG ACCTCTACCT CAATGAAACG
GCGATCGGTA AAGGGACAAG TATTTCACTG ACCGAGTTTC AAATGGAGGC AATGTGGGTG
CAGCGCCAAA TAGACCCCGT ACTGGATCCG ATCAGCCATT TTACGCTCGG AGTGAAACCC
ATCAATCATT TTAAATTGTA G
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| Protein sequence | MVNSAVHSHT PELLVSEVRG LVVRQVLLHR TEAAEAAAMR VTRQRFDLAG RMIAATDPRL
ASANRSTVYS LGGNTLATES VDAGWRVALF GEAGQVLNGW DARGNERQLE YDLLLRLRNI
IEQNRCAERF AYGQTDAAGH NQCNQLVRHD DTAGSRLLQD YSLHGSVLSE TRHFMLAAEA
ADWPSAEPDR NELVEPAGLQ TCRVFNAQGE VLKQTDASGN SQLSTHNLAG QLHSTDLILN
DSMHARKLVS AIRYNAFNQV EQETAGNGVV SLYAYDQQDG RLIGLSAISA DGTLLQQLNY
SYDPVGNILL VNDASQPDRY CDNQLIEPIS RYRYDTVYKL IEATGREVRN GASHGPALPG
LQPLPTLDPC QVSNYKQNYS YDTAGNLLQM RHEGAHNFTR NMHVAPDSNR SLPDDDGDVD
FATSFDANGN LLQLVRGQVM GWDARNQLQH ITTVQREDGS NDDERYVYDG QGQRCRLIST
AQASGRTLIN EVRYLPGLEI RTTADGEILH VVTTQAGRNS VRVLHWEAGK PDSIANDQVR
YSLGDHLGSS TLELDQQGGL ISQENYYPFG GTAWWAARSA VEAKYKTVRY SGKERDASGL
YYYGFRYYAP WLQRWINPDP AGDVDGLNAY NFVSNNPVML IDKDGRVGER IAAAYAPNEP
ALPSYFKDTY LSEASNDQVT ADARAGALWN DPPRFLGAGY AYAPAWYYNA NLQQRIDLLN
ERSWMSHGIV TTLFNHDHDT VKKPYEITSR HWNNVDEFTN TYTPEKWMIQ SNFKASKSND
YHASDVIRYQ YETVSKSLGF FGVLPSLVEN QYVMNTKTLS ITSGLESSTP HLLDLYLNET
AIGKGTSISL TEFQMEAMWV QRQIDPVLDP ISHFTLGVKP INHFKL
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