| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4244 |
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| Symbol | |
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| ID | 1185924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4779401 |
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| End bp | 4781215 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395590 |
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| Product | amidase family protein |
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| Protein accession | NP_794005 |
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| Protein GI | 28871386 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA CAGCTCTGCC GAACAACTTT CGTCTGGACA CCGTACGCGC CGCCTACCAG
GCCGGCCATC TGTCGCCGCG CCAGCTGATT CTGGCCCTGC GGGAAAAGGC CGCTGCGCTC
AATCCCGCTT ATCACCTGTT CATTCACCTG CTCAGCCCGG CTGAACTTGA GCCTTATCTG
GCCGCACTGG AGGGCCGTGA CCTCAAGGAT CTGCCGCTGT ACGGCGTACC TTTCGCGATC
AAGGACAACA TCGACCTGGC CGGCATTCCA ACCACCGCCG CCTGCCCGGA TTACGCCTAC
ACGCCAGAGC GCTCGGCGAC CATTGTCGAA CAACTGATCG CATTGGGCGC AGTGCCAATG
GGCAAGACCA ATCTCGACCA GTTCGCCACC GGCCTCAATG GCAGTCGCTC GCCCTATGGC
GTTTGTCCCA ACAGCATTCT TAACGAATAT CCGTCCGGCG GTTCAAGCTC CGGCTCTTCG
CTGGCGGTCG CGCTGGGGGT CAGCAGTTTC TCGCTGGGCA CCGACACCGC AGGCTCGGGG
CGAGTGCCTG CAGCGCTGAA CAATCTGGTG GGCATGAAAG CCAGCAAGGG CTTGATCTCC
ACAGCGGGTG TGGTGCCCGC CTGCCGCACG CAGGATTGCG TTTCCACCTT CACCGCCACG
GCAAGAGAGG CCAGCCAGTT GCTGGGGTTG GTCGCGAGGT TTGACCCGCG CGACGCGTAT
AGCCGTCGCA ACCCGCAGTG GAACGACGCC TCGGCGTTCG GCGCGCCCCG TCCGTTGCGC
TTTGGTGTAC CGCGAAGTGA AGACCTGGCG TTTTTCGGCT GCAGCGAAGG GCCGCAGCTG
TTTAGCGACG CCATCGAACG CCTCACTGCG CTGGGCGGCG AGGCGGTCAC GCTGGACCTG
TCGCCCTTTC TGGAAGCTGC ACAGCTGCTG TACGACGGCC CGTGGGTGGC CGAGCGCTAC
AGCATCGCCG GGCCATTGAT GGAGGAGCAT CCAGAGGCTG TATTGCCGGT GATTCGCGAC
GTACTGGCCA AGGCACCGGG TGTGAACGGG GTCGATACCT TTCGCGCGCA ATACCGCCTG
CAAGCGCTGA AAGCGCTGTG TGATCAGGCG CTGGAGGGAC TGGATTGCGT GATGACACCG
AGCATCGGTC GCCCGGTAAC CTCGGCAGAA CTGCTCGCCG AGCCCGTGCT GCGTAACTCG
GAACTGGGTT ATTACACCAA CTTCGTCAAC CTGCTCGATT ATGCCGCCAT CGCAGTACCC
AGCGCCTTCA TGAGCAACGG CCTGCCGTGG GGCGTGACGC TGTTCGGGCG GGCGTTCACT
GACCAGTATC TGCTCAGTCT CGCCGATGCA TTCCAGCGGC AAACCGCCCT GCCGCTGATT
GGCGGTGACA GCCCGTCGCT GCCCGCGCCG AGCAATGCCG CCCGCAACGA CATGGCCCGG
CTGGTGGTCT GCGGCGCGCA CCTGGACGGC CTGGCGCTGA ACTGGCAGCT CATACAACGC
GGTGCCCGCT TGCTGGAGGT CACATACAGC TCAGCCGACT ATCAACTTTA CGCACTGGCC
GGCGGCCCGC CGTTCAGGCC CGGCATGGTG CGGGTGGCCG AGCACGGCGT AGCGATTGCC
GTTGAAGTCT GGGAGCTGCC GAGCGCCGAA CTGGGCTCGT TCCTGACCGG TATTCCGGCA
CCGCTCGGCC TAGGCAAAGT GCAACTGGCC GATGGTCGCT GGGAAACCGG CTTCATTTGC
GAAACGTCCG GGCTTGAAGG CGCTCGCGAT ATCAGCCACC TCGGCGGCTG GCGCGCCTAC
CTGCAACAGC TGTGA
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| Protein sequence | MNDTALPNNF RLDTVRAAYQ AGHLSPRQLI LALREKAAAL NPAYHLFIHL LSPAELEPYL
AALEGRDLKD LPLYGVPFAI KDNIDLAGIP TTAACPDYAY TPERSATIVE QLIALGAVPM
GKTNLDQFAT GLNGSRSPYG VCPNSILNEY PSGGSSSGSS LAVALGVSSF SLGTDTAGSG
RVPAALNNLV GMKASKGLIS TAGVVPACRT QDCVSTFTAT AREASQLLGL VARFDPRDAY
SRRNPQWNDA SAFGAPRPLR FGVPRSEDLA FFGCSEGPQL FSDAIERLTA LGGEAVTLDL
SPFLEAAQLL YDGPWVAERY SIAGPLMEEH PEAVLPVIRD VLAKAPGVNG VDTFRAQYRL
QALKALCDQA LEGLDCVMTP SIGRPVTSAE LLAEPVLRNS ELGYYTNFVN LLDYAAIAVP
SAFMSNGLPW GVTLFGRAFT DQYLLSLADA FQRQTALPLI GGDSPSLPAP SNAARNDMAR
LVVCGAHLDG LALNWQLIQR GARLLEVTYS SADYQLYALA GGPPFRPGMV RVAEHGVAIA
VEVWELPSAE LGSFLTGIPA PLGLGKVQLA DGRWETGFIC ETSGLEGARD ISHLGGWRAY
LQQL
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