Gene PSPTO_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4242 
Symbol 
ID1185922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4774958 
End bp4775575 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID637395588 
Producthypothetical protein 
Protein accessionNP_794003 
Protein GI28871384 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAC ATAATCATCA TTGCTGCGAC GCGACCATTG CGGCAGGTGA GCCTTTTCTG 
GCCGAAGTGA AGGCCGGGCA AACCGTGCGC ATTCTCGACC TGGAGGGCAA TCAGGCCGTC 
GACACGCTGT TTTTCAGCCT CGCCAACTCG CGCGAACGCT ATGACGTGCA GCGCACCTTG 
CGCCGTCAGA ACAGCGTTTA CCTGACCACC GGCAGCGTGC TGTTTTCCAA CCTCGGCCGG 
CCAATGCTGA CCATCATCGA TGACACCTGC GGTCGCCACG ACACGTTGGG CGGCGCGTGT 
GCACAAGAGA GCAACACCGT GCGTTACGCC CTGGAAAAAC GCTACATGCA CAGCTGCCGC 
GACAACTACC TGCGCGCCTG CCTGCACGAC GGTCGCCTGA CCAAGGCCGA CATCGGCCCC 
AATATCAATT TCTTCATGAA CGTGCCGGTG ACCGCCGACG GCGGCCTGAC CTTTGAAGAC 
GGTATTTCTG CGCCCGGCAA ATACGTTGAG TTGCGTGCCG AGATGGACGT GATCGTGCTG 
ATCTCCAACT GCCCGCAATT GAATAATCCG TGCAACGGCT ACAACCCGAC GCCTGCACAG 
TTGCTGATTC GCGACTGA
 
Protein sequence
MNSHNHHCCD ATIAAGEPFL AEVKAGQTVR ILDLEGNQAV DTLFFSLANS RERYDVQRTL 
RRQNSVYLTT GSVLFSNLGR PMLTIIDDTC GRHDTLGGAC AQESNTVRYA LEKRYMHSCR 
DNYLRACLHD GRLTKADIGP NINFFMNVPV TADGGLTFED GISAPGKYVE LRAEMDVIVL 
ISNCPQLNNP CNGYNPTPAQ LLIRD