Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4216 |
Symbol | era |
ID | 1185896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4749403 |
End bp | 4750305 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395562 |
Product | GTP-binding protein Era |
Protein accession | NP_793977 |
Protein GI | 28871358 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.305152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATA CAACTGCAAC CCGCTGTGGC TATGTTGCCA TCGTCGGCCG TCCTAACGTA GGCAAGTCCA CGCTGCTCAA CCATATTCTG GGTCAGAAGC TGGCGATCAC CTCGCGCAAG CCGCAGACCA CTCGCCACAA CATGCTGGGC ATCAAGACCG AGGGCACCGT GCAGGCGATC TACGTCGATA CCCCCGGCAT GCACAAAAAT GGCGAGAAAG CGCTCAATCG CTACATGAAC AAGACTGCAT CGGCCGCGTT GAAAGACGTC GACGTGGTGA TTTTCGTGGT AGACCGCACC CGCTGGACCG ACGAAGACCA GATGGTTCTG GAGCGCGTTC AATACGTGCA GGGCCCGGTC ATTCTGGCGA TCAACAAGAC CGACCGCATC GAAGACAAGA GTGACCTGAT GCCGCATCTG GAGTGGCTGC AAGGCCAACT GCCGAATGCG TCCATCGTGC CGATTTCTGC GCAGCACGGG CACAACCTTG AAGCGCTGGA AAGCCTCATC GCCTCTCATC TGCCGGAGAA TGATCACTTC TTCCCGGAAG ACCAGATTAC CGACCGAAGC AGCCGTTTTC TGGCTGCCGA GCTGGTTCGC GAGAAAATCA TGCGCCAGTT GGGCGCCGAG CTTCCGTACC AGATCACCGT CGAGATCGAA GAGTTCAAGC AGCAGGGCCG TACCCTGCAC ATCCACGCGC TGATCCTCGT CGAGCGTGAT GGGCAGAAGA AGATCATCAT TGGCGACAAG GGCGATCGCA TCAAACGCAT CGGCAGTGAT GCACGTCGCG ACATGGAAGT GCTGTTTGAC TCCAAGGTCA TGCTCAACCT GTGGGTCAAG GTCAAGGGTG GCTGGTCCGA TGACGAGCGG GCACTGCGCT CGCTGGGTTA CGGCGACCTT TAA
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Protein sequence | MNDTTATRCG YVAIVGRPNV GKSTLLNHIL GQKLAITSRK PQTTRHNMLG IKTEGTVQAI YVDTPGMHKN GEKALNRYMN KTASAALKDV DVVIFVVDRT RWTDEDQMVL ERVQYVQGPV ILAINKTDRI EDKSDLMPHL EWLQGQLPNA SIVPISAQHG HNLEALESLI ASHLPENDHF FPEDQITDRS SRFLAAELVR EKIMRQLGAE LPYQITVEIE EFKQQGRTLH IHALILVERD GQKKIIIGDK GDRIKRIGSD ARRDMEVLFD SKVMLNLWVK VKGGWSDDER ALRSLGYGDL
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