| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4211 |
|---|
| Symbol | |
|---|
| ID | 1185891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4745655 |
|---|
| End bp | 4746047 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637395557 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_793972 |
|---|
| Protein GI | 28871353 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5513] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTG TTCGTTTTCT TGCACCGTTG AGCCTTGCGC TGCTGACGGC GTGTGCGCAA
ACGCCCAAGA ACATCGTTTC GATCGACACG CAAAGCGACT GCCCGCTGGC CCTCAAAACC
GGTCAGACGC TGATCCTCAC GCTGCCCAGC AACCCGACGA CCGGCTTTCG CTGGCTGACC
CAGAACCCGG CGCAAAGTAT CCTGCGCAGC CTTGGGCCGG AGGTGTACGC CAACGCCGAG
AGCAAGGAGA TGGTCGGCAA CGGTGGGCAG TCGGTCTGGC GCTACAAGGC AACTGACGCA
GGGACCGGGC GACTGGTGAT GACCTACCAG CAGCCGTGGG CTCCGGAGGT GCCGCCGGAG
CAGACCTTCG AGTGCGCAAT CACGGTGAAC TGA
|
|---|
| Protein sequence | MPPVRFLAPL SLALLTACAQ TPKNIVSIDT QSDCPLALKT GQTLILTLPS NPTTGFRWLT
QNPAQSILRS LGPEVYANAE SKEMVGNGGQ SVWRYKATDA GTGRLVMTYQ QPWAPEVPPE
QTFECAITVN
|
|---|
| |