| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4080 |
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| Symbol | |
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| ID | 1185760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4587746 |
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| End bp | 4588414 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395427 |
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| Product | DNA-binding response regulator, LuxR family |
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| Protein accession | NP_793842 |
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| Protein GI | 28871223 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.542388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGCCC TTAGCCAACC CAGCGACAAA GGCGTCATCC TGATCGTTGA CGACACCCCG
GACAACCTTG CGCTGCTCTC CGATGCGCTG GACGAAGCGG GCTACATGGT CATGGTGGCA
CTTGACGGCA CCAGCGCCCT GCTGCGCATC CAGCGCCGCC GCCCGGACCT GATCCTGCTC
GACGCCATGA TGCCGGGAAT GGACGGCTTC GAGACCTGCC GGCAAATCAA GCAACAGCCC
GACGCCTCGA ACATCCCGGT ACTGTTCATG ACCGCCCTGA CCGACAGCGA ACACGTCGTC
GAAGGCTTCG AAGCCGGCGC GATCGACTAC GTGATCAAAC CCATCCAGTG CAACGAAATG
ATCGCCAGAG TCGCCTCCCA CCTGCGCACC GCGCGCACCC TGCAATCCGC CCGCAGCACC
TCGCAACCAC CCGGCATCAA CGACGCCGCC GCCTACACCC ACCTCTCCAG CAGCTTTCAA
CTGACCGAAC GCGAAGTCGA CGTGCTTCGC TGGGTAGCGT GCGGCAAGAC CAACAAGGAC
ATTGCCGATA TTTTGCAGTT GAGCCCCAGG ACGGTTAACA AACATCTGGA GCATATTTAT
GTGAAGTTGG GGGTGGAGAC GCGGACGGCG GCGACGTCGG TTGCGTTGGC GGCGATGGCA
AGGGTGTAG
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| Protein sequence | MNALSQPSDK GVILIVDDTP DNLALLSDAL DEAGYMVMVA LDGTSALLRI QRRRPDLILL
DAMMPGMDGF ETCRQIKQQP DASNIPVLFM TALTDSEHVV EGFEAGAIDY VIKPIQCNEM
IARVASHLRT ARTLQSARST SQPPGINDAA AYTHLSSSFQ LTEREVDVLR WVACGKTNKD
IADILQLSPR TVNKHLEHIY VKLGVETRTA ATSVALAAMA RV
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