| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4077 |
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| Symbol | |
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| ID | 1185757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4581873 |
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| End bp | 4582754 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395424 |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_793839 |
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| Protein GI | 28871220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGT TCAACGGGCT TTCGGTGTTC TGCGTGCTGC TGCTCATGGC GCTCGGGCTG
GCAATCATTT TCGGCCAGAT GGGCGTGATC AACATGGCCC ACGGCGAGTT TCTGACCGTC
GGCGCGTACA CCACCTATGT GCTGTCGACG CTGGTGCAGA CCTATATGCC GTCTATGCAG
CCTTACTACT TTTTCTTCGC CATTGCGCTG TCGTTCGTAG TGGCGGGCTC GATTGGCTGG
CTGGTCGAGC GGGTGATGAT CAGCCGTCTC TATCACCGGC CGCTGGACAC ATTGTTGGCG
ACCTGGGGTT TGTCGCTGGT AATGCAACAA GCGCTGCGTT CGATCTTCGG TGCCCGGGAA
GTCAGCGCCA ACCCGCCCGA GTGGCTGATG GGCGCGGTCA GCCTGAGCGA CACCATCGAG
ATTCCGCGCA ATGGCCTGTT CGTGATGGCG CTGACCGTGC TGCTGACCGG TTGCATCTTC
CTCATGCTGT ACCGCACACG CTGGGGCCTG CATGTGCGGG CAACGGTGCA GAACCGGGTG
ATGAGCCGCG CCGTGGGGAT CAACACCCGC GAAGTGGACC GCATGACCTT TGCGCTGGGT
TGCGGCGTGG CGGGGGTGGC GGGCGCGGCG TTTACCACCA TCGGCTCCAC CGGGCCGACG
GCCGGGTCGC TGTATATCGT CGACACGTTT CTGGTGGTGG TCTTCGGCGG TGCGCAAAGC
CTGCTGGGCA CGATTGCTTC GGCGTTCACC ATTGCCCAGA CGCAGTCGAT TGCCGAGTTT
TTCATGAGTG GATCGATGGC CAAGGTGCTG ACCCTGTCTG CCGTGATTCT GATTCTGCTG
ATGCGCCCGC AAGGGTTGTT CTCAAGCAAA GTTCGCAAGT AG
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| Protein sequence | MQGFNGLSVF CVLLLMALGL AIIFGQMGVI NMAHGEFLTV GAYTTYVLST LVQTYMPSMQ
PYYFFFAIAL SFVVAGSIGW LVERVMISRL YHRPLDTLLA TWGLSLVMQQ ALRSIFGARE
VSANPPEWLM GAVSLSDTIE IPRNGLFVMA LTVLLTGCIF LMLYRTRWGL HVRATVQNRV
MSRAVGINTR EVDRMTFALG CGVAGVAGAA FTTIGSTGPT AGSLYIVDTF LVVVFGGAQS
LLGTIASAFT IAQTQSIAEF FMSGSMAKVL TLSAVILILL MRPQGLFSSK VRK
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