Gene PSPTO_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4058 
SymbolmutS 
ID1185738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4563546 
End bp4566113 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content61% 
IMG OID637395405 
ProductDNA mismatch repair protein MutS 
Protein accessionNP_793820 
Protein GI28871201 
COG category[L] Replication, recombination and repair 
COG ID[COG0249] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01070] DNA mismatch repair protein MutS
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.374775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC TTTCCCAACA TACACCCATG ATGCAGCAGT ACTGGAAACT CAAAAACCAG 
CACCTGGATC AACTGATGTT TTATCGCATG GGCGATTTCT ATGAAATCTT CTACGAAGAC
GCCAAAAAAG CCGCCAAGCT GCTGGACATC ACTCTGACCG CCCGCGGCCA GTCGGCCGGG
CAAAGCATCC CCATGTGCGG GATTCCCTAT CACGCGGCCG AGGGCTACCT GGCCAAGCTG
GTGAAGCTGG GCGAGTCGGT GGTCATCTGC GAACAGATCG GCGACCCGGC CACCAGCAAA
GGCCCGGTGG ATCGTCAGGT CGTACGCATC ATTACGCCCG GCACCATCAG CGATGAAGCC
TTGCTGGATG AGCGTCGAGA CAACCTGATC GCTGCCGTCC TCGGTGACGA ACGCCTGTTC
GGCCTGGCTG TGCTGGACAT CACCAGCGGC AACTTCAGCG TGCTGGAGAT CAAAGGCTGG
GAGAACCTGC TGGCCGAGCT TGAGCGCATC AATCCGGTCG AGCTGTTGAT CCCGGATGAC
TGGCCGCAAG GTTTGCCCGC TGAAAAACGT CGCGGTGCAC GGCGTCGCGC GCCATGGGAT
TTCGAGCGTG ATTCGGCCCA TAAAAGTCTG TGTCAGCAAT TTTCAACCCA AGACCTGAAA
GGCTTTGGCT GCGAAACCCT GACGCTGGCC ATTGGCGCTG CCGGCTGCCT GCTCGGTTAC
GCCAAAGAAA CCCAGCGCAC TGCCCTGCCG CATTTGCGCA GCCTGCGTCA CGAGCGTCTC
GACGACACGG TGATCCTTGA TGCTGCCAGC CGTCGCAACC TGGAGCTAGA CACCAACCTG
TCCGGTGGCC GCGATAACAC GCTGCAATCG GTCATGGACC GTTGCCAGAC CGCGATGGGC
ACGCGACTGC TGACCCGCTG GCTGAATCGT CCGCTGCGCG ACCTGAGCAT TCTTCAGGCT
CGTCAGACGT CCATCACTTG CTTTCTGGAA CGCTATCGCT TCGAGAACCT GCAACCGCAA
CTCAAGGAAA TAGGCGATAT CGAGCGGATT CTGGCGCGGA TCGGTCTACG CAACGCTCGG
CCACGGGATC TTGCCCGTCT GCGCGACGCC CTGAGTGCAC TGCCTGAGTT GCAACAGGCG
ATGACTGACC TTGATGCGCC GCACTTGCAG CAACTTGCAC AGACCGCCAG TACCTACCCG
GAACTGGCTG ACCTGCTGCA ACGCGCGATC AACGATAACC CGCCTGCCGT GATTCGTGAC
GGCGGCGTGC TGAAGACCGG CTATGACGCC GAGCTGGACG AGCTGCAATC GCTGAGCGAA
AACGCCGGTC AGTTCCTGAT TGATCTGGAA GCCCGGGAAA AAGCCCGGAC CGGACTGAGC
CATCTGAAAG TCGGCTACAA CCGCGTGCAT GGCTACTTCA TCGAGCTGCC GAGCAAACAG
GCCGAACAGG CGCCCGCCGA CTACATTCGC CGCCAGACCC TCAAGGGGGC CGAGCGCTTT
ATTACGCCGG AACTCAAAGA GTTCGAGGAC AAGGCGCTGT CAGCAAAAAG TCGCGCACTG
GCTCGCGAGA AGATGCTTTA CGAGACGTTG CTCGAAGACC TGATCGGCCA CCTTGCGCCG
CTGCAGGACA CCGCGGCTGC ACTGGCCGAG CTGGACGTAC TGAGCAACCT TGCAGAGCGC
GCGCTGAATC TGGACCTCAA CTGCCCGCGC TTCGTCGCCG AGCCGTGCAT GCGCATCGAA
CAGGGCCGCC ACCCTGTCGT CGAGCAGGTG CTGAGCACGC CTTTCGTGGC CAACGATCTG
GCACTGGACG ACAGCACGCG CATGCTGATC ATCACCGGCC CGAACATGGG CGGTAAATCC
ACTTACATGC GCCAGACGGC GCTGATCGTC CTGCTGGCCC ATATAGGCAG CTTCGTGCCC
GCCGCCAGCT GCGAGCTGTC GCTGGTTGAC CGGATCTTCA CCCGCATCGG CTCCAGTGAC
GATCTGGCCG GCGGACGCTC GACGTTCATG GTGGAAATGA GCGAAACAGC CAACATCCTG
CACAACGCCA CCGATAAAAG CCTGGTGCTG ATGGATGAAG TCGGGCGCGG CACCAGCACC
TTCGACGGTC TGTCGCTGGC CTGGGCGGCG GCGGAATGCC TGGCGCAACT GCGTGCCTAC
ACGCTGTTCG CGACGCACTA TTTCGAGCTG ACGGTTTTGC CGGAAAGCGA GCCGCTGGTG
AACAACGTGC ACCTCAATGC CACCGAGCAT AACGAGCGAA TCGTGTTCCT GCACAGAGTA
CTGCCGGGGC CGGCCAGCCA GAGCTACGGC CTGGCGGTTG CGCAGCTTGC GGGCGTTCCG
GGGAAAGTCA TCACGCGCGC CAAAGAGCAC TTGCAGCGCC TGGAAACCAC CAGCCTGCCG
CACGAACAAC CGCGCGCGAA ACCCGGCAAA CCTGCGATCC CGCAACAGAG CGATATGTTC
GCAAGCCTGC CGCACCCGGT ACTCGATGAA CTGTCGAAGA TCAAGGTCGA CGACATGACC
CCGCGACAAG CGCTGGATTT GCTCTATACA TTGCAAACTC GCCTGTGA
 
Protein sequence
MTDLSQHTPM MQQYWKLKNQ HLDQLMFYRM GDFYEIFYED AKKAAKLLDI TLTARGQSAG 
QSIPMCGIPY HAAEGYLAKL VKLGESVVIC EQIGDPATSK GPVDRQVVRI ITPGTISDEA
LLDERRDNLI AAVLGDERLF GLAVLDITSG NFSVLEIKGW ENLLAELERI NPVELLIPDD
WPQGLPAEKR RGARRRAPWD FERDSAHKSL CQQFSTQDLK GFGCETLTLA IGAAGCLLGY
AKETQRTALP HLRSLRHERL DDTVILDAAS RRNLELDTNL SGGRDNTLQS VMDRCQTAMG
TRLLTRWLNR PLRDLSILQA RQTSITCFLE RYRFENLQPQ LKEIGDIERI LARIGLRNAR
PRDLARLRDA LSALPELQQA MTDLDAPHLQ QLAQTASTYP ELADLLQRAI NDNPPAVIRD
GGVLKTGYDA ELDELQSLSE NAGQFLIDLE AREKARTGLS HLKVGYNRVH GYFIELPSKQ
AEQAPADYIR RQTLKGAERF ITPELKEFED KALSAKSRAL AREKMLYETL LEDLIGHLAP
LQDTAAALAE LDVLSNLAER ALNLDLNCPR FVAEPCMRIE QGRHPVVEQV LSTPFVANDL
ALDDSTRMLI ITGPNMGGKS TYMRQTALIV LLAHIGSFVP AASCELSLVD RIFTRIGSSD
DLAGGRSTFM VEMSETANIL HNATDKSLVL MDEVGRGTST FDGLSLAWAA AECLAQLRAY
TLFATHYFEL TVLPESEPLV NNVHLNATEH NERIVFLHRV LPGPASQSYG LAVAQLAGVP
GKVITRAKEH LQRLETTSLP HEQPRAKPGK PAIPQQSDMF ASLPHPVLDE LSKIKVDDMT
PRQALDLLYT LQTRL