Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4058 |
Symbol | mutS |
ID | 1185738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4563546 |
End bp | 4566113 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395405 |
Product | DNA mismatch repair protein MutS |
Protein accession | NP_793820 |
Protein GI | 28871201 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.374775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC TTTCCCAACA TACACCCATG ATGCAGCAGT ACTGGAAACT CAAAAACCAG CACCTGGATC AACTGATGTT TTATCGCATG GGCGATTTCT ATGAAATCTT CTACGAAGAC GCCAAAAAAG CCGCCAAGCT GCTGGACATC ACTCTGACCG CCCGCGGCCA GTCGGCCGGG CAAAGCATCC CCATGTGCGG GATTCCCTAT CACGCGGCCG AGGGCTACCT GGCCAAGCTG GTGAAGCTGG GCGAGTCGGT GGTCATCTGC GAACAGATCG GCGACCCGGC CACCAGCAAA GGCCCGGTGG ATCGTCAGGT CGTACGCATC ATTACGCCCG GCACCATCAG CGATGAAGCC TTGCTGGATG AGCGTCGAGA CAACCTGATC GCTGCCGTCC TCGGTGACGA ACGCCTGTTC GGCCTGGCTG TGCTGGACAT CACCAGCGGC AACTTCAGCG TGCTGGAGAT CAAAGGCTGG GAGAACCTGC TGGCCGAGCT TGAGCGCATC AATCCGGTCG AGCTGTTGAT CCCGGATGAC TGGCCGCAAG GTTTGCCCGC TGAAAAACGT CGCGGTGCAC GGCGTCGCGC GCCATGGGAT TTCGAGCGTG ATTCGGCCCA TAAAAGTCTG TGTCAGCAAT TTTCAACCCA AGACCTGAAA GGCTTTGGCT GCGAAACCCT GACGCTGGCC ATTGGCGCTG CCGGCTGCCT GCTCGGTTAC GCCAAAGAAA CCCAGCGCAC TGCCCTGCCG CATTTGCGCA GCCTGCGTCA CGAGCGTCTC GACGACACGG TGATCCTTGA TGCTGCCAGC CGTCGCAACC TGGAGCTAGA CACCAACCTG TCCGGTGGCC GCGATAACAC GCTGCAATCG GTCATGGACC GTTGCCAGAC CGCGATGGGC ACGCGACTGC TGACCCGCTG GCTGAATCGT CCGCTGCGCG ACCTGAGCAT TCTTCAGGCT CGTCAGACGT CCATCACTTG CTTTCTGGAA CGCTATCGCT TCGAGAACCT GCAACCGCAA CTCAAGGAAA TAGGCGATAT CGAGCGGATT CTGGCGCGGA TCGGTCTACG CAACGCTCGG CCACGGGATC TTGCCCGTCT GCGCGACGCC CTGAGTGCAC TGCCTGAGTT GCAACAGGCG ATGACTGACC TTGATGCGCC GCACTTGCAG CAACTTGCAC AGACCGCCAG TACCTACCCG GAACTGGCTG ACCTGCTGCA ACGCGCGATC AACGATAACC CGCCTGCCGT GATTCGTGAC GGCGGCGTGC TGAAGACCGG CTATGACGCC GAGCTGGACG AGCTGCAATC GCTGAGCGAA AACGCCGGTC AGTTCCTGAT TGATCTGGAA GCCCGGGAAA AAGCCCGGAC CGGACTGAGC CATCTGAAAG TCGGCTACAA CCGCGTGCAT GGCTACTTCA TCGAGCTGCC GAGCAAACAG GCCGAACAGG CGCCCGCCGA CTACATTCGC CGCCAGACCC TCAAGGGGGC CGAGCGCTTT ATTACGCCGG AACTCAAAGA GTTCGAGGAC AAGGCGCTGT CAGCAAAAAG TCGCGCACTG GCTCGCGAGA AGATGCTTTA CGAGACGTTG CTCGAAGACC TGATCGGCCA CCTTGCGCCG CTGCAGGACA CCGCGGCTGC ACTGGCCGAG CTGGACGTAC TGAGCAACCT TGCAGAGCGC GCGCTGAATC TGGACCTCAA CTGCCCGCGC TTCGTCGCCG AGCCGTGCAT GCGCATCGAA CAGGGCCGCC ACCCTGTCGT CGAGCAGGTG CTGAGCACGC CTTTCGTGGC CAACGATCTG GCACTGGACG ACAGCACGCG CATGCTGATC ATCACCGGCC CGAACATGGG CGGTAAATCC ACTTACATGC GCCAGACGGC GCTGATCGTC CTGCTGGCCC ATATAGGCAG CTTCGTGCCC GCCGCCAGCT GCGAGCTGTC GCTGGTTGAC CGGATCTTCA CCCGCATCGG CTCCAGTGAC GATCTGGCCG GCGGACGCTC GACGTTCATG GTGGAAATGA GCGAAACAGC CAACATCCTG CACAACGCCA CCGATAAAAG CCTGGTGCTG ATGGATGAAG TCGGGCGCGG CACCAGCACC TTCGACGGTC TGTCGCTGGC CTGGGCGGCG GCGGAATGCC TGGCGCAACT GCGTGCCTAC ACGCTGTTCG CGACGCACTA TTTCGAGCTG ACGGTTTTGC CGGAAAGCGA GCCGCTGGTG AACAACGTGC ACCTCAATGC CACCGAGCAT AACGAGCGAA TCGTGTTCCT GCACAGAGTA CTGCCGGGGC CGGCCAGCCA GAGCTACGGC CTGGCGGTTG CGCAGCTTGC GGGCGTTCCG GGGAAAGTCA TCACGCGCGC CAAAGAGCAC TTGCAGCGCC TGGAAACCAC CAGCCTGCCG CACGAACAAC CGCGCGCGAA ACCCGGCAAA CCTGCGATCC CGCAACAGAG CGATATGTTC GCAAGCCTGC CGCACCCGGT ACTCGATGAA CTGTCGAAGA TCAAGGTCGA CGACATGACC CCGCGACAAG CGCTGGATTT GCTCTATACA TTGCAAACTC GCCTGTGA
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Protein sequence | MTDLSQHTPM MQQYWKLKNQ HLDQLMFYRM GDFYEIFYED AKKAAKLLDI TLTARGQSAG QSIPMCGIPY HAAEGYLAKL VKLGESVVIC EQIGDPATSK GPVDRQVVRI ITPGTISDEA LLDERRDNLI AAVLGDERLF GLAVLDITSG NFSVLEIKGW ENLLAELERI NPVELLIPDD WPQGLPAEKR RGARRRAPWD FERDSAHKSL CQQFSTQDLK GFGCETLTLA IGAAGCLLGY AKETQRTALP HLRSLRHERL DDTVILDAAS RRNLELDTNL SGGRDNTLQS VMDRCQTAMG TRLLTRWLNR PLRDLSILQA RQTSITCFLE RYRFENLQPQ LKEIGDIERI LARIGLRNAR PRDLARLRDA LSALPELQQA MTDLDAPHLQ QLAQTASTYP ELADLLQRAI NDNPPAVIRD GGVLKTGYDA ELDELQSLSE NAGQFLIDLE AREKARTGLS HLKVGYNRVH GYFIELPSKQ AEQAPADYIR RQTLKGAERF ITPELKEFED KALSAKSRAL AREKMLYETL LEDLIGHLAP LQDTAAALAE LDVLSNLAER ALNLDLNCPR FVAEPCMRIE QGRHPVVEQV LSTPFVANDL ALDDSTRMLI ITGPNMGGKS TYMRQTALIV LLAHIGSFVP AASCELSLVD RIFTRIGSSD DLAGGRSTFM VEMSETANIL HNATDKSLVL MDEVGRGTST FDGLSLAWAA AECLAQLRAY TLFATHYFEL TVLPESEPLV NNVHLNATEH NERIVFLHRV LPGPASQSYG LAVAQLAGVP GKVITRAKEH LQRLETTSLP HEQPRAKPGK PAIPQQSDMF ASLPHPVLDE LSKIKVDDMT PRQALDLLYT LQTRL
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