| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4006 |
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| Symbol | |
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| ID | 1185685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4518980 |
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| End bp | 4521406 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395353 |
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| Product | tail fiber protein H, putative |
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| Protein accession | NP_793768 |
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| Protein GI | 28871149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAA GCATCACCAT TGCCGGCGAA AAACTGATCG CCCAGAAACA AGCGGCTAAC
CTGCCGCTGA CCGTTGCCCG CTTCGTGCTG GCCAACGTGC CAGGCCTCAA CGTTTCCGGC
CCGGTCAACC GTGCCGGCGT CAAGCCGCCA GCGGCTCAGA TCGTCTACAC CGCAAGCATC
ACTCAGCAGG GCTTCGTCAA TCCCAACCAG GTCGTGTACA GCCTGTTGAT GGGCACCGAT
ATCGGTGACT TCGACTGGAA CTGGATCGGC ATGGAGACCA GCGACGACGT GCTGCTGTCG
GTCGCCTACG TGCCGTTGCA ACAGAAGCGC AAGAACGTGC TGCCCGACCA GATCGGCAAC
AACGTCACGC GCAACTTCCT GGTGGTGTTC GACGGTGCCC AGCAACTGAC CGGCATCAAG
ATCGACGCCA GTACCTGGCA GTTCGATTAC ACCGCGCGCA TGAAGGGCAT CGACGAGCGC
GAACGCATCA GCAACCGTGA CATGTTCGGG CGTGCCTGCT TTTTCGGCGC AGGCCTGCAG
TTGCAGAAGG TGGGCGCTGC CTACCAGCTC AACCCCGGCG TGGCGTATGT CGACGGCGTT
CGTCTGCAGC TCGATGCGGT GTTGCCCGTG ACCGTGCCGG CAGTGCCAAC CAAAGCCTGG
CTGGACGTGG TGCTGCAGCG CGAACTGAGC GATGTCGTGG CCTCGTTCAA GGTTGTGTTC
GGCCAGGACG TAAAGGTCGA TTACACCGAC AGCGCATCGG CCAGGCACTA CCTGGTGCCG
CTGGCCGACA TCACCGGTAC CAGCAGCCTG GTCGACCTGC GCCCGGTCGA GGCGATCGAC
AGCGAGCTGG TGAAGTACTT CGCGGCTCGG GTTGGGGATT ATCCGGCGCT GCGTGCGCGC
GCGACGACCA AAGGCGACGT CGGTCTGGGC AACCTGCCCA ACGCGATCAG CGACGATCCA
AACAGCAACA GCGGCGGGGT GCTGGCCACC ACCAGAATGG TCAATGCCGT ACGCACGGTA
ATCAACCAGG CGATCGCATC GATTGTTGAT GGCTCGACCG CCGTCGGCAG GGCTGCACGT
CTGGCCACAG CGCGAGCCAT TCGGTTCAAC GGCGCGGCCA GTGGCATCGG AACCTATGAC
GGCGCGGGTG ATACCGATAT CACCTTGACC CTGGCTGATA GCGGCGTTGC AGCGGGCACT
TACACGCGGG TTGCCGTCAA TGTGAAAGGC CTGGTGACCA GCGGCGGCAA CCCTACGACG
CTGGCCGGAT ACGGTATTAC TGACGCGTAC AGCAAGGATG ACGCGAACAG CAGTTTCGTG
AAGCAAGGCG GTGCCCCGGG CATGCTGGGC AACCGAATCA ACATCGGCTG GACCGGAGAC
AGGGTCAAAG TGAGTGTCGA CGGCACCGAC GGGGGCAGGA TCTGGACGGA CACCACGTTC
AATCCCAACG ACAAGGCCAA TAAAGCCACC TCGCTGAGCG GCTACGGGAT TACTAACGCC
TACACCGTCG AGCAGGTAAA CGACCTGGTG AACAGGCGGG TACAGGCCGA CTCCATCATC
CATGCTGGTT TTGCCAGCAA CAATACTGAC TATCCGTATT TCCGTCGTAG TTCTGATGAA
AAGGTTTATT ACCTGCAGCC GCAGATCGGT TACACGCCAT TGCAGCAGGG CGGTGGTGCT
GGTCAGAAGA CCAACAAGGT GTTTATCGGT TGGTCGGACG TCGGTCTAAA GCTGACGGTC
GACACCATAG ACATTGGACG GATCTGGACG GAACAGTCGT TCAACCCCAA CGATAAAGCC
AACAGGTCCA ACTCAATCGC CGGCTACGGC ATCACCGATT GCTACACCGT TAACCAAGTG
AATTCACTTC TTGGCGACAA AGCCAACAGG TCTAACTCAA TTGCGGGCTA TGGCATCACT
GACTGTTACA CGGTCACTCA GGTCAACTCT ATCGTGAACC AGCGCGTCGC GGGGGATGCG
ATCCAGACCG CCGGTTTCGC CAGTGACAAC CCTGAATTCC CTTATTTTCG TCGTAGCTCG
ACAGGTGGCA TTCATTACCT GCAGAACCGC CTCGGGTTTA CGCCGGTGCA GCAGGGTGGT
GGCGCAAACC AGGCCGGCAA TCAGTTGCGT CTGGGATGGG CGACCAACGC TGCAGGTATT
CGGGCGCAGG TGGATGCCAC TGACCTTGGC CTGTTGTGGG GCGAGCAGAA CTTTTATCGT
CCTGACAACA ACAACTTTCT GGCTGTTTCC ATCACCGCGA CCGAAGTGCG ACTGCCTGCA
GGCGGCACCT GGTGTTACTC GCTGATGCAT TACTACTCAG GTGGTGCAGG TGTGGTCGGT
CGAAGTGGCC AGGCAGCCGG CGGCACCGTT ATTTCATTCA GTGGCGGAAG CACCATTTAC
GGTTTCGCCT GGAGGTACGC AGCATGA
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| Protein sequence | MAASITIAGE KLIAQKQAAN LPLTVARFVL ANVPGLNVSG PVNRAGVKPP AAQIVYTASI
TQQGFVNPNQ VVYSLLMGTD IGDFDWNWIG METSDDVLLS VAYVPLQQKR KNVLPDQIGN
NVTRNFLVVF DGAQQLTGIK IDASTWQFDY TARMKGIDER ERISNRDMFG RACFFGAGLQ
LQKVGAAYQL NPGVAYVDGV RLQLDAVLPV TVPAVPTKAW LDVVLQRELS DVVASFKVVF
GQDVKVDYTD SASARHYLVP LADITGTSSL VDLRPVEAID SELVKYFAAR VGDYPALRAR
ATTKGDVGLG NLPNAISDDP NSNSGGVLAT TRMVNAVRTV INQAIASIVD GSTAVGRAAR
LATARAIRFN GAASGIGTYD GAGDTDITLT LADSGVAAGT YTRVAVNVKG LVTSGGNPTT
LAGYGITDAY SKDDANSSFV KQGGAPGMLG NRINIGWTGD RVKVSVDGTD GGRIWTDTTF
NPNDKANKAT SLSGYGITNA YTVEQVNDLV NRRVQADSII HAGFASNNTD YPYFRRSSDE
KVYYLQPQIG YTPLQQGGGA GQKTNKVFIG WSDVGLKLTV DTIDIGRIWT EQSFNPNDKA
NRSNSIAGYG ITDCYTVNQV NSLLGDKANR SNSIAGYGIT DCYTVTQVNS IVNQRVAGDA
IQTAGFASDN PEFPYFRRSS TGGIHYLQNR LGFTPVQQGG GANQAGNQLR LGWATNAAGI
RAQVDATDLG LLWGEQNFYR PDNNNFLAVS ITATEVRLPA GGTWCYSLMH YYSGGAGVVG
RSGQAAGGTV ISFSGGSTIY GFAWRYAA
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