Gene PSPTO_3968 details

Gene Information

• Locus tag: PSPTO_3968
• Symbol: exsB
• ID: 1185644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4476573
• End bp: 4477253
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637395315
• Product: exsB protein
• Protein accession: NP_793732
• Protein GI: 28871113
• COG category: [R] General function prediction only
• COG ID: [COG0603] Predicted PP-loop superfamily ATPase
• TIGRFAM ID: [TIGR00364] exsB protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.193691
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCAATA CTGAAAAAAG AGCCGTAATC CTGCTGTCCG GCGGCCTCGA CTCCGCGACC 
GTAGTCGCCA TGGCCCGCGC AGAAGGTTAC GCCTGCTACA CCATGAGCTT CGACTACGGC 
CAGCGTCATC GCGCCGAGCT GGATGCCGCA GCCCGCGTTG CCCGCGATCT GGGTGCGGTC 
GAACACAAGG TTATCGGCCT GAACCTCAGC GGCATTGGCG GCTCGGCACT GACTGACAGC 
TCCATTGCCG TGCCTGAGTC GCCCTCTGAG GGCATTCCGG TAACCTACGT ACCGGCACGC 
AACACCGTGT TCCTGTCGCT GGCGCTGGGC TGGGCAGAAG TGCTCGGTGC GCGGGATATC 
TTCATCGGCG TCAATGCGGT GGATTACTCA GGCTACCCTG ATTGCCGTCC CGAGTTCGTG 
GAGTCTTTCG AGCGCATGGC CAACCTGGCG ACCAAGGCTG GAGTGGAAGG GCAGGGCTTC 
ACAATCAGGG CGCCGCTGCA GAACCTGAGC AAGTCGGACA TCGTCAAGGC GGGCATTGCT 
TTGGGGGTCG ACTACGCACT GACGGTTTCC TGCTATCAAG CCGATGATCA GGGACGTGCC 
TGTGGCAAAT GCGACAGCTG CCGCTTGCGC GCAGAGGGCT TCACAGCCTC CGGCATGTCA 
GACCCGACAC GTTATTTTTA A 

 

Protein sequence

MTNTEKRAVI LLSGGLDSAT VVAMARAEGY ACYTMSFDYG QRHRAELDAA ARVARDLGAV 
EHKVIGLNLS GIGGSALTDS SIAVPESPSE GIPVTYVPAR NTVFLSLALG WAEVLGARDI 
FIGVNAVDYS GYPDCRPEFV ESFERMANLA TKAGVEGQGF TIRAPLQNLS KSDIVKAGIA 
LGVDYALTVS CYQADDQGRA CGKCDSCRLR AEGFTASGMS DPTRYF