Gene PSPTO_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3942 
Symbol 
ID1185616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4453493 
End bp4454095 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID637395289 
Producthypothetical protein 
Protein accessionNP_793708 
Protein GI28871089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.191282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGG CACCACTGAT CAACACGCTG AACGTGAACA TTTCCGTCGA AGGGTTATCC 
CCTGTCGCGG CCTGTCTTGT GCGCGGTTTT CTGGCAAGCG GAGCAACCCG GCCAGAGCCG
GCGAAGGATG CGCACTCGGA AACACTGGTA ACCCCTGAGA TCGGCGCGTA TTGGGCTGGG
CAGGGCGGCA TCTACGGCGG CGTGCGCCAG TATCCCGAAG GGCTGTGCCA TGTGATCTAC
GCGCAAGAGG ATGCCGGGAA TTTCAAATGG GGTCCGAGCG GCACTGAAAC TGGTGCGACG
AGCAGGTTCG ATGGACGCAC CAATACCCAG GCACTGCTTA CTCTGAACGC TGACTTTCCT
GCAGCTTTCT ATGCGAGTCA GTACACGGCA GACGGTCAAA GCGACTTCTA CCTGCCCTCC
GCCGCTGAAC TGAATCACGG TTGGGCATAC CTTTCCGACC GCTTTGAAGA GGGCAGCTAC
TGGTCGAGCA CGCAGCGCTC CGCCGACTTC GCATTCACTC AGGGCTTCGA TGGTGGCACT
CAGCACGACT ACGACGAGTT CAACGAGCTT CGCGTCCGCC CCGTCCGCAG ATTCATTCGC
TGA
 
Protein sequence
MKKAPLINTL NVNISVEGLS PVAACLVRGF LASGATRPEP AKDAHSETLV TPEIGAYWAG 
QGGIYGGVRQ YPEGLCHVIY AQEDAGNFKW GPSGTETGAT SRFDGRTNTQ ALLTLNADFP
AAFYASQYTA DGQSDFYLPS AAELNHGWAY LSDRFEEGSY WSSTQRSADF AFTQGFDGGT
QHDYDEFNEL RVRPVRRFIR