Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3942 |
Symbol | |
ID | 1185616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4453493 |
End bp | 4454095 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395289 |
Product | hypothetical protein |
Protein accession | NP_793708 |
Protein GI | 28871089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.191282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGG CACCACTGAT CAACACGCTG AACGTGAACA TTTCCGTCGA AGGGTTATCC CCTGTCGCGG CCTGTCTTGT GCGCGGTTTT CTGGCAAGCG GAGCAACCCG GCCAGAGCCG GCGAAGGATG CGCACTCGGA AACACTGGTA ACCCCTGAGA TCGGCGCGTA TTGGGCTGGG CAGGGCGGCA TCTACGGCGG CGTGCGCCAG TATCCCGAAG GGCTGTGCCA TGTGATCTAC GCGCAAGAGG ATGCCGGGAA TTTCAAATGG GGTCCGAGCG GCACTGAAAC TGGTGCGACG AGCAGGTTCG ATGGACGCAC CAATACCCAG GCACTGCTTA CTCTGAACGC TGACTTTCCT GCAGCTTTCT ATGCGAGTCA GTACACGGCA GACGGTCAAA GCGACTTCTA CCTGCCCTCC GCCGCTGAAC TGAATCACGG TTGGGCATAC CTTTCCGACC GCTTTGAAGA GGGCAGCTAC TGGTCGAGCA CGCAGCGCTC CGCCGACTTC GCATTCACTC AGGGCTTCGA TGGTGGCACT CAGCACGACT ACGACGAGTT CAACGAGCTT CGCGTCCGCC CCGTCCGCAG ATTCATTCGC TGA
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Protein sequence | MKKAPLINTL NVNISVEGLS PVAACLVRGF LASGATRPEP AKDAHSETLV TPEIGAYWAG QGGIYGGVRQ YPEGLCHVIY AQEDAGNFKW GPSGTETGAT SRFDGRTNTQ ALLTLNADFP AAFYASQYTA DGQSDFYLPS AAELNHGWAY LSDRFEEGSY WSSTQRSADF AFTQGFDGGT QHDYDEFNEL RVRPVRRFIR
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