Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3905 |
Symbol | |
ID | 1185578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4420195 |
End bp | 4421040 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395257 |
Product | ATPase, AAA family |
Protein accession | NP_793676 |
Protein GI | 28871057 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCG AAGGCACCCC GGCATACGTC GCCACTGACG ATCTCAAGCT GGCAGTCAAC GCGGCGATCA CGCTGGAGCG CCCACTGCTG GTAAAAGGTG AGCCCGGCAC CGGCAAGACC ATGCTGGCCG AGCAACTGGC CGAGTCCTTC GGCGCACGGT TGATCACCTG GCATATCAAG TCCACCACCA AGGCGCATCA GGGCCTCTAC GAATACGATG CCGTGAGCCG TCTGCGCGAC TCGCAACTGG GCGTCGACAA GGTCCACGAT GTGCGCAATT ACCTTAAAAA AGGCAAGCTG TGGGAGGCGT TCGAGTCCGA TGAGCGGGTG ATTCTGCTGA TCGACGAGAT CGACAAGGCC GACATCGAGT TCCCCAACGA CCTGTTGCAG GAACTCGACA AGATGGAGTT CTACGTTTAC GAAATCGATG AAACGATCAA AGCCAAAAAG CGCCCGATCA TCATCATTAC CTCCAATAAC GAGAAGGAAT TGCCGGACGC CTTCCTGCGT CGCTGCTTCT TCCACTACAT CGCCTTCCCG GACCGGGCAA CTCTGCAGCG CATCGTCGAT GTGCATTACC CGAACATCAA GAAAGACCTG GTCAGCGAAG CACTGGACGT CTTTTTCGAC GTGCGCAAAG TGCCCGGCCT GAAAAAGAAG CCCTCGACGT CCGAACTGGT GGACTGGCTG AAACTGCTGA TGGCCGACAA CATCGGTGAA GCGGTGCTGC GCGAGCGCGA TCCGACCAAG GCGATACCGC CGCTGGCCGG GGCGCTGATC AAGAACGAGC AGGACGTGCA CCTGCTGGAA CGCCTGGCCT TCATGAGCCG TCGCGGCAAT CGTTGA
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Protein sequence | MKFEGTPAYV ATDDLKLAVN AAITLERPLL VKGEPGTGKT MLAEQLAESF GARLITWHIK STTKAHQGLY EYDAVSRLRD SQLGVDKVHD VRNYLKKGKL WEAFESDERV ILLIDEIDKA DIEFPNDLLQ ELDKMEFYVY EIDETIKAKK RPIIIITSNN EKELPDAFLR RCFFHYIAFP DRATLQRIVD VHYPNIKKDL VSEALDVFFD VRKVPGLKKK PSTSELVDWL KLLMADNIGE AVLRERDPTK AIPPLAGALI KNEQDVHLLE RLAFMSRRGN R
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