Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3890 |
Symbol | |
ID | 1185561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4402330 |
End bp | 4403103 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395240 |
Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
Protein accession | NP_793661 |
Protein GI | 28871042 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000104915 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC ATCGGTTGGC AGCGGCGATT GCCCTGGTCG GTCTGGTACT CGCAGGTTGT GATAAGCAGG CCAGCACCGT AGAGCTGAAA ACTCCAGCAC AAAAAGCGTC TTATGGCATC GGTCTGAACA TGGGCAAAAG CCTGGCTCAG GAAGGCATGG ATGATCTCGA CTCCAAGGCT GTAGCCCTGG GTATCGAAGA CGCCGTCGGC AAGAAAGATC AGAAACTCAA GGATGAAGAG CTGGTTGAAG CCTTCTCTGC GCTGCAGAAG CGTTCCGAAG AGCGTCTGGC GAAGATGAGT GAAGAAGCAT CGGCAGCCGG CAAGAAGTTC CTCGAAGAGA ACGGCAAGAA GGATGGCGTG GTTACCACCG CTTCCGGCTT GCAGTATCAG ATCATCAAGA AAGCTGATGG CGCTCAGCCA AAGCCGACTG ATGTTGTGAC TGTTCACTAC GAAGGCAAGC TGATTGACGG CAAGGTGTTT GACAGCTCCG TTGAACGCGG CAGCCCCATT GATCTGCCGG TTGGCGGCGT TATCCCGGGT TGGGTCGAAG GTCTGCAACT GATGCACGTA GGCGAGAAGG TCAAACTTTT CATCCCTAGT GATCTGGCTT ACGGTGCCCA GAGCCCGAGC CCGGCGATCC CGGCCAATTC GGTTCTGGTC TTTGACCTCG AATTGCTCGG CATCAAAGAC CCGGCGGCTG CTCCGGCTGT TGGCGCTGAC GCCGACGAAG AAGAAGACGC AGCACCTGCT GCATCGGCTC CAGCCAAGAA GTAA
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Protein sequence | MKQHRLAAAI ALVGLVLAGC DKQASTVELK TPAQKASYGI GLNMGKSLAQ EGMDDLDSKA VALGIEDAVG KKDQKLKDEE LVEAFSALQK RSEERLAKMS EEASAAGKKF LEENGKKDGV VTTASGLQYQ IIKKADGAQP KPTDVVTVHY EGKLIDGKVF DSSVERGSPI DLPVGGVIPG WVEGLQLMHV GEKVKLFIPS DLAYGAQSPS PAIPANSVLV FDLELLGIKD PAAAPAVGAD ADEEEDAAPA ASAPAKK
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