Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3873 |
Symbol | minD |
ID | 1185544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4385492 |
End bp | 4386304 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395224 |
Product | septum site-determining protein MinD |
Protein accession | NP_793645 |
Protein GI | 28871026 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2894] Septum formation inhibitor-activating ATPase |
TIGRFAM ID | [TIGR01968] septum site-determining protein MinD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.748671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCAAGA TTCTCGTAGT TACATCCGGC AAGGGTGGTG TGGGCAAGAC CACCACCAGC GCCGCTATCG GTACAGGCCT CGCATTGCGC GGCCACAAGA CAGTCATCGT CGACTTCGAC GTCGGCCTGC GTAACCTCGA CCTGATCATG GGTTGCGAGC GTCGTGTCGT GTATGACTTC GTCAACGTGG TCAATGGCGA AGCCAACCTG CAACAGGCGT TGATCAAGGA CAAGAAGATC GAAGGCCTGT TCGTACTGGC CGCCAGCCAG ACCCGGGACA AGGATGCACT GACCAAGGAG GGCGTTGAAA AAGTCCTCAT GGAGCTGAAG GAATCGTTCG AATACATCGT CTGCGACTCG CCGGCGGGTA TCGAAACCGG TGCTCATCTG GCGATGTACT TCGCTGATGA AGCCATCGTC GTGACCAACC CGGAAGTCTC GTCGGTACGT GACTCCGATC GCATGCTGGG CCTGCTGGCC AGCAAGTCGC GTCGCGCCGA GCGTGGCGAA GACCCGATCA AGGAACACCT GCTGCTGACC CGTTACAACC CTGAGCGAGT CAGCAAAGGC GAGATGCTCG GCGTTGAAGA CGTCAAGGAA ATCCTTGCCG TTACCCTGCT CGGCGTGATC CCGGAGTCGC AGGCTGTCCT CAAGGCCTCC AACCAGGGCG TTCCGGTTAT TCTGGACGAC CAGAGCGACG CCGGTCAGGC CTACAGCGAT GCCGTTGACC GCCTGCTGGG CAAGGACCGG GAGCATCGCT TCCTGGATGT ACAGAAAAAA GGATTCTTTG AACGTCTGTT CGGGGGTAAC TGA
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Protein sequence | MAKILVVTSG KGGVGKTTTS AAIGTGLALR GHKTVIVDFD VGLRNLDLIM GCERRVVYDF VNVVNGEANL QQALIKDKKI EGLFVLAASQ TRDKDALTKE GVEKVLMELK ESFEYIVCDS PAGIETGAHL AMYFADEAIV VTNPEVSSVR DSDRMLGLLA SKSRRAERGE DPIKEHLLLT RYNPERVSKG EMLGVEDVKE ILAVTLLGVI PESQAVLKAS NQGVPVILDD QSDAGQAYSD AVDRLLGKDR EHRFLDVQKK GFFERLFGGN
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