Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3830 |
Symbol | fabF |
ID | 1185501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4337832 |
End bp | 4339076 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395182 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
Protein accession | NP_793603 |
Protein GI | 28870984 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.819559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGCGTA GACGCGTCGT GGTCACCGGG ATGGGCATGC TTTCGCCACT GGGCAATGAC GTGCCCAGCA GTTGGCAAGG CATTCTGGCG GGCCGCAGTG GCATTGGCCT TATCGAGCAC ACGGACTTGT CAGCCTTCAC CACCCGTTTC GGCGGTTCGG TCAAGGGTTT CAACGTCGAA GAATACCTGG CGCCCAAAGA AGCGCGTCGG CTCGATCTCT TCATTCAGTA CGGCCTCGCA GCCAGCTTTC AGGCGGTGCG TAACGCCGGC CTTGAAGTCA CTGATGCAAA CCGTGAGCGC ATCGGCGTGG CAATGGGTTC GGGCATCGGT GGTCTGACCA ACATCGAAAA CAGCAGTCGT CTGCTGCATG AGCAAGGTCC AGGGCGGATT TCTCCGTTTT TTGTGCCAGG CTCGATCATC AACATGATTT CCGGTTTCCT GTCTATCCAT CTGGGTGCAC AGGGGCCTAA CTACGCCATC GCCACAGCGT GCACGACCGC GACTCACTGC ATCGGCATGG CGGCGCGCAA CATCGCCTAC GACGAAGCTG ACGTGATGAT TGCCGGTGGT GCTGAAATGG CAGCCTGTGG CCTCGGTCTG GGCGGCTTCG GCGCTGCACG CGCGTTGTCG ACCCGCAACG ACGACCCCAC GCGTGCCAGC CGTCCGTGGG ACAAAGGCCG TGACGGTTTC GTGCTGTCCG ACGGTGCCGG TGCGATGGTG CTTGAAGAAC TCGAGCACGC CAAAGCGCGC GGCGCGACCA TCTATGCCGA ACTGGTCGGG TTTGGCATGA GTGGCGACGC CTATCACATG ACCTCCCCGC CTGATGACGG TGCCGGCGCC GCACGTTGCA TCGTCAACGC CCTGCGTGAT GCCAAGGTCA ATGCGGATCA GGTGCAGTAC ATCAACGCAC ACGGTACCTC GACACCTGCG GGCGATCTGG CCGAGGCATC TGCGATCAAG TCGGTGTTCG GCGATCACGC CTACAAGCTG GCGGTCAGCT CGACCAAGTC GATGACCGGC CACTTGCTGG GGGCTGCCGG TGCGGTCGAG GCAATTTTCA GCGTGCTGGC AATGGTTGAT CAGGTGGCTC CGCCGACCAT CAATCTGGAT GAACCGAGCG AAGGCTGCGA CCTGAACTTT GTGCCTCACG AAGCGCGCCG GATGCCGATT GATGTAGTCC TGTCGAACTC CTTCGGGTTC GGTGGCACCA ACGGCTCGCT GGTGTTTCGT CGGTTCGCCG AGTAA
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Protein sequence | MSRRRVVVTG MGMLSPLGND VPSSWQGILA GRSGIGLIEH TDLSAFTTRF GGSVKGFNVE EYLAPKEARR LDLFIQYGLA ASFQAVRNAG LEVTDANRER IGVAMGSGIG GLTNIENSSR LLHEQGPGRI SPFFVPGSII NMISGFLSIH LGAQGPNYAI ATACTTATHC IGMAARNIAY DEADVMIAGG AEMAACGLGL GGFGAARALS TRNDDPTRAS RPWDKGRDGF VLSDGAGAMV LEELEHAKAR GATIYAELVG FGMSGDAYHM TSPPDDGAGA ARCIVNALRD AKVNADQVQY INAHGTSTPA GDLAEASAIK SVFGDHAYKL AVSSTKSMTG HLLGAAGAVE AIFSVLAMVD QVAPPTINLD EPSEGCDLNF VPHEARRMPI DVVLSNSFGF GGTNGSLVFR RFAE
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