| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3824 |
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| Symbol | |
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| ID | 1185495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4333052 |
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| End bp | 4333837 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395176 |
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| Product | deoxyribonuclease, TatD family |
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| Protein accession | NP_793597 |
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| Protein GI | 28870978 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0273387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTAG ATTCCCATTG TCACCTTGAT CGTCTCGATC TCACCCAGCA CGACGGTTCC
CTCGATGCAG CCCTTGAGGC AGCGCGGGGC AGGGGTGTCG GGCATTTTCT ATGCATAGGC
GTCAGCGCTG ACAACGCAGG TGCGGTCAAG GCACTTGCCG ATCGTTATGC CGACGTTGAT
TGCTCGGTCG GCATTCATCC GCTGGACGTG AAACCGGGTG AGATGCCGCC GCTGGACTGG
TTGCTCAAGG AGCTGGATCA CCCGCGTGTG GTGGCCATTG GTGAAACCGG TCTGGACTAC
CACTACGAGC CCGAAGCCGC CGAGCTGCAG CAGGCGTCTT TTCGCGTGCA CCTGGAAGCG
GCCAGCGTGA CCGGCAAGCC TGTGATCATC CACACCCGTG GCGCGCGCGC CGACACACTG
AGCCTTTTGC GAGAAGCGGC GCTGCCCCAG GCGGGCGTGC TGCATTGTTT CACCGAAGAC
TGGGACATGG CCAAAGCCGC GCTGGACATG GGCTATTACA TCTCGCTTTC CGGCATCGTC
ACCTTTCGCA ATGCCGACGC CTTGCGTGAC GTGGCCCGGC AGGTGCCTGC TGATCGCCTG
CTGGTCGAGA CAGACTCTCC GTATCTTGCC CCGATCCCTT ATCGGGGCAA GCCGAATCTG
CCGCAATACG TGCGTGAAGT GGCTGAGTTT CTGGCGATGC TGCGTGGCGA AAGCTATGAG
CGTTTCGCCG AACAGACCAC CGCCAACTTC GCCCGCCTTT TCCCGTTGGC GCACCTTCAG
CGCTGA
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| Protein sequence | MLVDSHCHLD RLDLTQHDGS LDAALEAARG RGVGHFLCIG VSADNAGAVK ALADRYADVD
CSVGIHPLDV KPGEMPPLDW LLKELDHPRV VAIGETGLDY HYEPEAAELQ QASFRVHLEA
ASVTGKPVII HTRGARADTL SLLREAALPQ AGVLHCFTED WDMAKAALDM GYYISLSGIV
TFRNADALRD VARQVPADRL LVETDSPYLA PIPYRGKPNL PQYVREVAEF LAMLRGESYE
RFAEQTTANF ARLFPLAHLQ R
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