Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3793 |
Symbol | ppnK |
ID | 1185461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4295734 |
End bp | 4296624 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395143 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | NP_793567 |
Protein GI | 28870948 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0107774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAT TTCGAAATAT CGGCATCATC GGTCGCCTCG GCAGTGTTCA GGTGCTCGAT ACCGTACGCC GACTCAAGAG ATTCCTGCTG GACCGGCATC TGCATGTCAT CCTCGAAGAG ACCATTGCCG AAGTCCTGCC CGGTCATGGC CTGCAGACTT CGTCGCGCAA GATGCTTGGC GAGGTCTGCG ACATGGTCAT CGTGGTCGGT GGCGATGGCA GCCTGTTGGG TGCTGCGCGT GCCCTGGCCC GGCACAATGT GCCGGTGCTG GGCATCAATC GCGGCAGCCT GGGCTTTCTG ACCGACATCC GCCCCGACGA GCTGGAGGTC AAGTGCGCCG AAGTGCTCGA TGGGCATTAT CTGGTCGAAA ACCGCTTCCT GCTGCAGGCC GAAGTGCGCC GCCACGGTGA AGCCATCGGC CAGGGCGATG CGCTCAACGA CGTGGTACTG CACCCCGGCA AGTCCACGCG CATGATCGAG TTCGAAATCT ACATAGACGG CCAGTTTGTC TGTAGCCAGA AGGCCGACGG CCTGATCGTC GCGACACCGA CCGGTTCGAC CGCCTACGCG CTGTCGGCGG GCGGGCCGAT CATGCACCCC AAGCTGGACG CCATCGTGAT CGTGCCGATG TACCCGCACA CGCTGTCCGG GCGGCCCATC GTGGTTGACG GCAACAGCGA GCTGAAAATC GTCGTGTCCA AGGACATGAC CATTTATCCG CAAGTGTCCT GCGACGGGCA GAACCACTTC ACCTGCGCAC CGGGTGACAC CATTACGGTC AGCAAGAAGC CGCAGAAGCT GCGCCTGATT CACCCGTTGG ATCACAACTA TTACGAAGTC TGCCGCACCA AGCTCGGCTG GGGCAGCAGG CTCGGCGGCG GGGGCGATTA A
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Protein sequence | MEQFRNIGII GRLGSVQVLD TVRRLKRFLL DRHLHVILEE TIAEVLPGHG LQTSSRKMLG EVCDMVIVVG GDGSLLGAAR ALARHNVPVL GINRGSLGFL TDIRPDELEV KCAEVLDGHY LVENRFLLQA EVRRHGEAIG QGDALNDVVL HPGKSTRMIE FEIYIDGQFV CSQKADGLIV ATPTGSTAYA LSAGGPIMHP KLDAIVIVPM YPHTLSGRPI VVDGNSELKI VVSKDMTIYP QVSCDGQNHF TCAPGDTITV SKKPQKLRLI HPLDHNYYEV CRTKLGWGSR LGGGGD
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