| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3743 |
|---|
| Symbol | glnS |
|---|
| ID | 1185411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4229193 |
|---|
| End bp | 4230902 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637395093 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | NP_793517 |
|---|
| Protein GI | 28870898 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0260392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGG ATCCTATGAG CAAGCCCACT CCAGAACCCG CTGCCCATTC AAAGGCAGGC
CCAGCCGTAC CGACCAACTT CCTGCGTCCG ATCGTGCAGG CAGACCTGGA CTCGGGCAAA
CACAGCAAAA TCATCACGCG CTTTCCGCCG GAGCCCAATG GCTACCTGCA CATTGGTCAT
GCCAAGTCGA TCTGCGTGAA TTTCGGTCTG GCCAAGGAGT TCGGTGGCGA TACGCACCTG
CGTTTCGATG ACACCAACCC GGCCAAGGAA GACCAGGAAT ACATCGACGC CATCATGAAC
GACGTCAAGT GGCTGGGCTT CGAGTGGGCC GGTGAAGTGC GTTACGCCTC GCAGTATTTC
GATCAGTTGC ACGACTGGGC GGTCGAGCTG ATCAAGGCCG GCAAGGCCTA CGTGGACGAT
CTGACCCCCG AGCAGGCCCG CGAATACCGT GGCACCCTGA CCGAGCCGGG CAAGAACAGC
CCGTTCCGTG AGCGCAGCGT TGAGGAAAAT ATCGACCTGT TCGCGCGCAT GAAGGCTGGT
GAATTCGAGG ACGGCGCTCG CGTACTGCGC GCCAAAATCG ACATGGCCTC GCCCAACATG
AACCTGCGTG ATCCGATTCT GTACCGCATT CGTCATGCAC ACCACCACCA GACCGGTGAC
AAGTGGTGCA TCTACCCGAT CTACGACTTC ACCCACGGCC AGTCGGATGC CATCGAGGGG
ATCACCCACT CGATCTGCAC CCTGGAGTTC GAAAGCCACC GTCCGTTGTA TGACTGGTTC
CTCGACAACC TGCCGGTGCC GTGCAAACCT CGCCAGTACG AGTTCTCGCG CCTGAACCTG
AACTACACCA TCACCAGCAA GCGCAAGCTC AAGCAACTGG TTGACGAAAA ACACGTCAAC
GGCTGGGATG ACCCGCGCAT GTCGACGCTG TCGGGTTTTC GCCGTCGTGG CTACACGCCC
AAGTCCATTC GCAATTTCTG CGAAATGATC GGCACCAACC GTTCCGACGG CGTGGTCGAT
TTCGGCATGC TCGAGTTCAG CATTCGTGAC GATCTGGACC ACAGCGCCCC GCGTGCCATG
TGCGTGCTGC GCCCGCTGAA AGTCGTGATC ACCAACTACC CGGAAGGTCA GGTCGAGAAG
CTGGAGCTGC CGCGCCATCC GAAAGAAGAC CTGGGCATGC GCGAGCTGCC GTTTTCGCGG
GAAATCTACA TCGACCGCGA CGATTACATG GAAGAGCCGC CGAAGGGCTA CAAGCGCCTT
GAGCCCAATG GCGAAGTGCG TCTGCGTGGC AGCTATGTGA TCCGTGCCGA CGAAGCGATC
AAGGACGCCG ACGGCAACAT CGTCGAACTG CGTTGCTCCT ACGACCCGGA CACCCTGGGC
AAGAACCCCG AAGGCCGCAA GGTCAAAGGC GTGGTGCACT GGGTGCCGGC GGCCGAGAGC
GTTGAATGCG AAGTGCGTCT GTACGATCGC CTGTTCCGCT CAGCCAACCC GGAAAAAGCC
GAAGACGGCG CGAGCTTCCT GGACAACATC AACCCCGATT CCCTGCAAGT GCTGACCGGT
TGTCGTGCCG AACCTTCATT GGGTCATGCG CAACCGGAAG ACCGTTTCCA GTTCGAACGC
GAAGGTTATT TCTGCGCGGA CATCAAGGAC TCGAAACCCG GTCAACCAGT CTTCAACCGC
ACGGTCACGT TGCGGGATTC CTGGACCTGA
|
|---|
| Protein sequence | MSKDPMSKPT PEPAAHSKAG PAVPTNFLRP IVQADLDSGK HSKIITRFPP EPNGYLHIGH
AKSICVNFGL AKEFGGDTHL RFDDTNPAKE DQEYIDAIMN DVKWLGFEWA GEVRYASQYF
DQLHDWAVEL IKAGKAYVDD LTPEQAREYR GTLTEPGKNS PFRERSVEEN IDLFARMKAG
EFEDGARVLR AKIDMASPNM NLRDPILYRI RHAHHHQTGD KWCIYPIYDF THGQSDAIEG
ITHSICTLEF ESHRPLYDWF LDNLPVPCKP RQYEFSRLNL NYTITSKRKL KQLVDEKHVN
GWDDPRMSTL SGFRRRGYTP KSIRNFCEMI GTNRSDGVVD FGMLEFSIRD DLDHSAPRAM
CVLRPLKVVI TNYPEGQVEK LELPRHPKED LGMRELPFSR EIYIDRDDYM EEPPKGYKRL
EPNGEVRLRG SYVIRADEAI KDADGNIVEL RCSYDPDTLG KNPEGRKVKG VVHWVPAAES
VECEVRLYDR LFRSANPEKA EDGASFLDNI NPDSLQVLTG CRAEPSLGHA QPEDRFQFER
EGYFCADIKD SKPGQPVFNR TVTLRDSWT
|
|---|
| |