| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3738 |
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| Symbol | |
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| ID | 1185406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4222386 |
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| End bp | 4223252 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395088 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_793512 |
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| Protein GI | 28870893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.482953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGG TGCAGAACAA CAAGGCCTGG TGGCTGGTGA TGCCGGTGTT TCTGCTGGTG
GCATTCAGCG CAATCATTCC GATGATGACC GTGGTCAATT ATTCGGTGCA GGACATCTTC
GATCAGTCCA GCCGCTATTT CGTCGGCACC GACTGGTTCA GACAGGTCTT GCAGGACCCG
CGCCTGCATG ATTCGCTGCT GCGCCAGTTC ATCTACTCGG GCTGCGTGCT GCTGATCGAG
ATCCCGCTGG GCATCGCGAT CGCCCTGACC ATGCCCACCA AAGGCCGCTG GTCGTCGTTG
TGCCTGATCG TGATGACCAT TCCGTTGCTG ATTCCGTGGA ACGTGGTCGG CACCATCTGG
CAGATCTTCG GCCGTGGCGA CATCGGTCTG CTCGGTTACA CGCTGAACAA CGTGCTGGGC
ATCAACTACA ACTATGCCGC CAATGCCTCG GACGCCTGGG TGACCGTGCT GGTCATCGAC
GTCTGGCACT GGACCTCGCT GGTGGCGTTG CTCTGCTATT CGGGGCTGCG GGCCATTCCG
GATGTTTACT ATCAGGCGGC GCGGATCGAT CGTGCTTCCG GCTGGGCCAT CTTCCGGCAT
ATCCAGTTGC CAAAAATGAA GAGCGTGTTG TTGATCGCGG TGATGCTGCG TTTCATGGAC
AGCTTCATGA TTTACACCGA GCCGTTCGTG CTCACCGGTG GCGGTCCGGG CAACTCCACG
ACGTTCCTCA GTCAGACCCT GACCACCATG GCGCTCGGTC AGTTCGACCT GGGGCCTGCG
GCGGCGTTCT CGCTGGTTTA TTTCCTGATC ATTCTGTTGG TGTCATGGGT GTTTTACACC
GCCATGACTC ACAGCGAAAA GAATTGA
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| Protein sequence | MRKVQNNKAW WLVMPVFLLV AFSAIIPMMT VVNYSVQDIF DQSSRYFVGT DWFRQVLQDP
RLHDSLLRQF IYSGCVLLIE IPLGIAIALT MPTKGRWSSL CLIVMTIPLL IPWNVVGTIW
QIFGRGDIGL LGYTLNNVLG INYNYAANAS DAWVTVLVID VWHWTSLVAL LCYSGLRAIP
DVYYQAARID RASGWAIFRH IQLPKMKSVL LIAVMLRFMD SFMIYTEPFV LTGGGPGNST
TFLSQTLTTM ALGQFDLGPA AAFSLVYFLI ILLVSWVFYT AMTHSEKN
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