| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3715 |
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| Symbol | mltD |
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| ID | 1185380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4191678 |
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| End bp | 4193270 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395062 |
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| Product | membrane-bound lytic murein transglycosylase D |
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| Protein accession | NP_793489 |
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| Protein GI | 28870870 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.284464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCAT CTATCAGCAA GCCTTCACAT TCGGACGCAT TAACTCGGTT GGCCCAGGCC
ATGGCCGTCA CCGCGAGCGC GCTTCTGGCC GGCTGCCAGA GCACTGCCAG CGTCGACCCT
GTCAGCAGCC ACCGCACGCC GAACATGGCC GCCGGTATCA AGCAAAAGCC GATTTTTCTG
TCTCACAAGC CCACCACGCC CCTCGCCCCG CCACAAGATG TGTGGGAGCG CATGCGTCAG
GGCTTTCAAC TGCAACAAGG CAACGACCAG AACCCCCGTA TCGATCAACA GCGCCTGTGG
TTCGCCAACA ACCCTTCCTT TCTGGAAAAC GCTGGTGAGC GCGGCAGCCT GTACATGCAT
TACATCGTAG AGCGCCTCGA AGAACGCAAC ATGCCGCTGG AGCTTGCCCT GCTTCCGGTG
ATCGAAAGCG CCTACAACCC GATGGCTGTT TCACGCAGCC AGGCCGTCGG CCTCTGGCAG
TTCATCCCGT CCACCGGGCG CTACTTCAAC CTGCGCCAGA CCAGCTTCTA CGACGGGCGT
CGCGACATTC AGGCCTCCAC GGTTGCCGCA CTGGATTACC TGACCCGCCT GCACGACATG
TTCAACGGTG ACTGGTTGCT GGCCCTGGCC GCTTACAATG CCGGCGAAGG GACGGTCAGC
CGTGCCATCG AACGCAACGA CAAGCTCAAC CTGCCGACCG ACTACTGGAA CCTGCCACTC
CCGCAGGAAA CCCGCGACTA CGTGCCCAAG CTGCTGGCCC TGTCGCAGGT GGTGCTGTCG
CCCGAAGCCT ATGGCGTCAA CCTCAACCCG ATCGCCAACC AGCCCTATTT CGAAGTCGTC
GAACTCAACA AGCGTGTCGA CCTGTCCAAA GTGGCCAGCG CCGCCGACAT CGACGAAGAC
GAGCTTATCC AGCTCAACCC TGCCTACAAG AAGCGCCTGA CCGTCGATGG CCCCCAGCAC
TTGCTGGTGC CTACGTCCAA GGCGCAACTG CTGACCGCCA GCCTGCTGAC CATGAAGCAG
GAAGAACTGG TCGCCTGGCA GCCTTACCGC GTGCGCAAGG GTGATACGCT GGAAAGCCTG
GCGAGTCGCT ATCAGGTCAC GACCAGCTCG CTCAAAAGCA ATAACAAGCT GGCGGGCAAC
AAACTGAAAG TCGGCCAGTC CCTGAGCATT CCGGTGCAGC CAGGAACACG CTCCTCGCAA
CCGGTGTTCG AAGCGCTGGC CAGTAACGAC AAGCCGACGC GCACCCGTAC TTATAAAGTC
AAAAGCGGCG ACAATCTGAC CACCATCGCG CAAGCCAACA AGGTGGATGT CGAAGACCTG
CAACGCTGGA ACAAGCTCAC CGGCAAGAAG CTCAAGGTCG GTCAGGCGCT GGTCATGCAG
GACACCAGCA AAGCCGGCAA CAAGGCGGTC GCCAGCGCCA GCAGTAAAGA CAGCGAAAAG
AAATCCATGC AGTACAAGAT CCAGAAAGGC GACTCGATGT ACCTGGTCGC CAAGCGCTTC
AACGTCGAGA TGCAACATCT CAAGCGCTGG AACCCACGTA GCGGGCAGGC CCTCAAACCG
GGCCAGACCC TGACCGTTTA CCTGCCGCAC TGA
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| Protein sequence | MSSSISKPSH SDALTRLAQA MAVTASALLA GCQSTASVDP VSSHRTPNMA AGIKQKPIFL
SHKPTTPLAP PQDVWERMRQ GFQLQQGNDQ NPRIDQQRLW FANNPSFLEN AGERGSLYMH
YIVERLEERN MPLELALLPV IESAYNPMAV SRSQAVGLWQ FIPSTGRYFN LRQTSFYDGR
RDIQASTVAA LDYLTRLHDM FNGDWLLALA AYNAGEGTVS RAIERNDKLN LPTDYWNLPL
PQETRDYVPK LLALSQVVLS PEAYGVNLNP IANQPYFEVV ELNKRVDLSK VASAADIDED
ELIQLNPAYK KRLTVDGPQH LLVPTSKAQL LTASLLTMKQ EELVAWQPYR VRKGDTLESL
ASRYQVTTSS LKSNNKLAGN KLKVGQSLSI PVQPGTRSSQ PVFEALASND KPTRTRTYKV
KSGDNLTTIA QANKVDVEDL QRWNKLTGKK LKVGQALVMQ DTSKAGNKAV ASASSKDSEK
KSMQYKIQKG DSMYLVAKRF NVEMQHLKRW NPRSGQALKP GQTLTVYLPH
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