| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3689 |
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| Symbol | |
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| ID | 1185354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4155617 |
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| End bp | 4157155 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395036 |
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| Product | hypothetical protein |
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| Protein accession | NP_793463 |
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| Protein GI | 28870844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.116484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAT CCCACCAACT CCATCTCGTT CTAGGCGATC AGCTCTCCTT CGAGCTGGCC
TCCCTGCAGA ACCTGAACCC CGAGCACGCA ACGGTCCTGC TGGTCGAGGT GATGGAGGAG
GCGAGTCATG TGCCGCATCA TCCACAGAAA ATCGCGTTGA TCTTCAGCGC CATGCGTCAT
TTTGCCGAGG CGTTGCGCGA GCGTGGGGTT CGGGTGCAGT ACGTGACGCT CGATGATGCG
CAAAACACAG GCTCGGTGCC GGGCGAATTG CGTCGCTGGC AGGCCTTGTT GAACGCTGAG
CAATTGCACA TCACCGAGTG CGGCGACTGG CGGTTGGAGC AGTCGATCAA GGACGGTGGG
CTGCCGATTC AGTGGTATGC CGATACGCGC TTTCTTTGTT CCCGTGATGA GTTCGCGGCA
AGGGCGCACG GTAAAAAGCA GTTGCGCATG GAGTTTTTCT ACCGGGAGAT GCGGCGCAAA
AGCAGGTTGC TATTGAACGG TGACGGTACG CCGGTCGGCG GTGCCTGGAA CTTCGATGCC
GAGAACCGCA AGGCGCTGCC CAAGGGCGTG GCCGCGCCGT ACCCGATGCG CTTTTCGGCA
GATGCGATCA CTCGCGACGT GCTGACGCTG GTGGCGGAGC GTTTCGCCAG CCACTATGGC
TCGCTGGATA CCTTCGACTA CCCCGTCACG CAGGCGGATG CTCAGGCGTT GTGGGAGTAT
TTTCTGGATT TTGGTCTGGC GGGTTTCGGC GATTATCAAG ACGCGATGGC CACCGATGAG
CCTTTTCTGT TTCATGCGCG CATCAGCGCG GCGCTGAACA TCGGGCTGCT GGACTTGCGC
CAGATTTGCA GCGATGTCGA GTCCGCGTAT TGGTCGGGCA GGGTGGCGCT GAATGCCGCC
GAAGGGTTTA TCCGCCAATT GATTGGCTGG CGCGAATACG TGCGTGGCGT CTACTGGTTG
AAGATGCCTG ACTACGCCAG CGGCAACCTG TTTGGCAACA GCCGGCCGCT CCCGGAGTTT
TACTGGACCG GTGAAACGAA GATGAACTGC ATGAGCCAGG CGATCGGCCA GAGCCTGAAA
CATGCCTATG CCCATCATAT TCAGCGCCTG ATGGTGACCG GCAACTTTGC CTTGCTCGCC
GGTATCGTGC CGGAGCAGAT CTGCGAGTGG TACCTGGCAA TCTACATGGA CGCGTTCGAC
TGGGTCGAAC TGCCCAACAC GCTGGGCATG GTCATGCACG CCGATGGCGG CTATCTGGGC
TCCAAGCCTT ATTGTGCCAG TGGTCAGTAC ATCAAGCGCA TGTCTGATTA CTGCCGTGGC
TGCGCCTATA AGGTAACTGA AAGCACGACC GACGATGCCT GTCCGTTCAA CGCGCTCTAC
TGGCATTTCC TGATGCGTCA CAGCGACCAG TTACGTCGTA ACCAGCGCAT GGGCATGATC
TACAAGAACC TTGATCGCAT GGCCGAGGCC AAGCAACAGG CGCTGTGGGA GCGCGGCGAG
CACTTGCTGG CCAGGCTCGA CGCAGGAGAG GCGCTTTGA
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| Protein sequence | MTQSHQLHLV LGDQLSFELA SLQNLNPEHA TVLLVEVMEE ASHVPHHPQK IALIFSAMRH
FAEALRERGV RVQYVTLDDA QNTGSVPGEL RRWQALLNAE QLHITECGDW RLEQSIKDGG
LPIQWYADTR FLCSRDEFAA RAHGKKQLRM EFFYREMRRK SRLLLNGDGT PVGGAWNFDA
ENRKALPKGV AAPYPMRFSA DAITRDVLTL VAERFASHYG SLDTFDYPVT QADAQALWEY
FLDFGLAGFG DYQDAMATDE PFLFHARISA ALNIGLLDLR QICSDVESAY WSGRVALNAA
EGFIRQLIGW REYVRGVYWL KMPDYASGNL FGNSRPLPEF YWTGETKMNC MSQAIGQSLK
HAYAHHIQRL MVTGNFALLA GIVPEQICEW YLAIYMDAFD WVELPNTLGM VMHADGGYLG
SKPYCASGQY IKRMSDYCRG CAYKVTESTT DDACPFNALY WHFLMRHSDQ LRRNQRMGMI
YKNLDRMAEA KQQALWERGE HLLARLDAGE AL
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