Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3661 |
Symbol | |
ID | 1185326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4127968 |
End bp | 4130346 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395008 |
Product | xanthine dehydrogenase, C-terminal subunit |
Protein accession | NP_793435 |
Protein GI | 28870816 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAGC ATTCCTCCCC CCTCACCCAG GCCGACATGC TGGCCCTGTT TCAACAGGAC CTGAGCACTG GCGTCGGCCG CAGCGTGAAG CACGACAGCG CCGACAAACA TGTGTCCGGC GAAGCGGTGT ACATCGACGA TCGCCTTGAG TTTCCCAATC AACTGCACGT TTACGCGCGC CTCTCGGACC GCGCCCATGC GCGCATCGTC AGCATTGATA CCGCGCCCTG CCATGCGTTT GAAGGCGTAA GAATCGCGAT TACCCACCAA GACATTCCCG GCCTGAAAGA CATCGGCCCG CTGCTGCCCG GCGACCCGTT GCTGGCCATC GACAAGGTGG AATTCGTCGG CCAGCCGGTG CTTGCGGTTG CCGCGCGGGA TCTGGACGTC GCGCGTCAGG CAGCTATGGC GGCAATCATC GAATACGAAG ACCTGGAGCC GGTGCTGGAT GTGGTTCAGG CCTTGCGTCA GAAGCATTTC GTGCTCGACA GCCACACCCA CAAGCGCGGC GATTCGGCGA CGGCTCTGCA AGGCGCAACC CACCGTTTGC AGGGCAACCT GCACATTGGC GGCCAGGAAC ATTTCTACCT GGAAACCCAG ATCTCCTCGG TCATGCCGAC TGAAGACGGC GGCATGATTG TCTATTGCTC GACCCAGAAC CCCACGGAAA TCCAGAAGCT GGTGGCTGAG GTGCTGAACG TGCCGATGAA CCGCATTGTG GTCGATATGC GGCGCATGGG CGGTGGCTTC GGCGGCAAGG AAACTCAGGC CGCCAGCCCG GCGTGCCTGT GCGCAGTGAT TGCGCGGCTG ACCGGTCAGC CGACCAAGAT GCGCCTGCAA CGCTTCGAAG ACATGCAGAT GACCGGCAAG CGCCACCCGT TCTACATCGA ATACGACGTG GGCTTTGACG ATAACGGTCG CCTGCAAGGC ATCCAACTGG ATCTGGCCGC CAACTGCGGC TATTCGCCAG ACCTGTCGGC CTCGATTGTC GACCGCGCAA TGTTCCATGC CGACAACGCC TATTACCTGG GCGAAGCAAC CATCAACGGC CATCGCTGCA AGACCCACAC GGCGTCCAAC ACCGCGTACC GGGGCTTTGG CGGCCCGCAA GGCATGGTGG CCATCGAAGA AGTCATGGAC TGTATCGCAC GTTTTCTGGG CAAGGACCCG TTGGCGGTCC GCAAGGCCAA CTACTACGGC AAGACCGAAC GTAACGTCAC CCATTACTAC CAGACCGTCG AGCACAACCT GCTGGAAGAA ATGACGGCGG ATCTGGAACA GAGCAGCCAG TACGCCGAGC GCCGCGAGGC CATCCGGGGT TTCAACGCCA GCAGCCCGAT CCTGAAAAAA GGCCTGGCGC TGACGCCGGT AAAATTCGGC ATCTCGTTCA CCGCCAGCTT TCTCAATCAG GCGGGGGCGC TGATCCACAT TTACACCGAC GGCAGCATCC ACCTGAACCA CGGCGGCACC GAGATGGGCC AGGGTTTGAA CACCAAGGTC GCGCAAGTCG TGGCTGAAGT GTTTCAAGTT GATATTGACC GCATTCAGAT CACCGCGACC AACACCGACA AGGTGCCGAA CACCTCGCCG ACGGCGGCGT CCAGCGGCAC TGACCTGAAT GGCAAGGCGG CGCAAAACGC CGCTGAAATT CTCAAGCAAC GTCTGGTTGA ATTTGCCGCG CGGCATTACA ACGTGGCAGA AACCGAGGTC GAGTTTCGTA ACGGTCATAT ACGGATCGGT GAGATTGTCC TGCCCTTTGC CGAGTTGGCT CAACAGGCAT GGATGGGTCA GGTGTCGCTG TCCAGTACCG GTTATTACAA GACGCCGAAG ATCTTCTACG ACCGCAGCCA GGCGCATGGC CGGCCGTTCT ATTACTTCGC GTTCGGTGCG GCCTGCGTCG AGGTGATCGT CGACACCCTG ACCGGTGAAT ACAAGACTTT GCGCACTGAC ATCCTGCATG ACGTCGGCGC GTCGCTGAAC CCGGCCATCG ACATCGGTCA GGTCGAAGGC GGCTACATTC AGGGCGCTGG CTGGCTGACC ACCGAAGAGC TGGTGTGGAA CGACAAAGGC AAACTGATGA CCAGCGGCCC GGCGTCTTAC AAGATCCCGG CGGTGGCCGA CATGCCGCTG GATTTGCGGG TCAAGCTGGT GGAGAACCGC AAGAACCCGG AAGACACGGT GTTCCATTCC AAGGCCGTGG GCGAACCGCC GTTCATGCTC GGCATAGCCG CGTGGTGCGC AATCAAGGAC GCCGTGGCAA GCCTGGGTGA TTATCGCCAT CAACCGAACA TCGACGCCCC GGCGACGCCG GAAAAGGTGT TGTGGGGGTG TGAGCAGATG CGTCAGTTGC ACACAGCAGA GACCCATGAG TATGAATAA
|
Protein sequence | MSEHSSPLTQ ADMLALFQQD LSTGVGRSVK HDSADKHVSG EAVYIDDRLE FPNQLHVYAR LSDRAHARIV SIDTAPCHAF EGVRIAITHQ DIPGLKDIGP LLPGDPLLAI DKVEFVGQPV LAVAARDLDV ARQAAMAAII EYEDLEPVLD VVQALRQKHF VLDSHTHKRG DSATALQGAT HRLQGNLHIG GQEHFYLETQ ISSVMPTEDG GMIVYCSTQN PTEIQKLVAE VLNVPMNRIV VDMRRMGGGF GGKETQAASP ACLCAVIARL TGQPTKMRLQ RFEDMQMTGK RHPFYIEYDV GFDDNGRLQG IQLDLAANCG YSPDLSASIV DRAMFHADNA YYLGEATING HRCKTHTASN TAYRGFGGPQ GMVAIEEVMD CIARFLGKDP LAVRKANYYG KTERNVTHYY QTVEHNLLEE MTADLEQSSQ YAERREAIRG FNASSPILKK GLALTPVKFG ISFTASFLNQ AGALIHIYTD GSIHLNHGGT EMGQGLNTKV AQVVAEVFQV DIDRIQITAT NTDKVPNTSP TAASSGTDLN GKAAQNAAEI LKQRLVEFAA RHYNVAETEV EFRNGHIRIG EIVLPFAELA QQAWMGQVSL SSTGYYKTPK IFYDRSQAHG RPFYYFAFGA ACVEVIVDTL TGEYKTLRTD ILHDVGASLN PAIDIGQVEG GYIQGAGWLT TEELVWNDKG KLMTSGPASY KIPAVADMPL DLRVKLVENR KNPEDTVFHS KAVGEPPFML GIAAWCAIKD AVASLGDYRH QPNIDAPATP EKVLWGCEQM RQLHTAETHE YE
|
| |