Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3658 |
Symbol | |
ID | 1185323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4122095 |
End bp | 4125583 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395005 |
Product | chromosome segregation SMC protein, putative |
Protein accession | NP_793432 |
Protein GI | 28870813 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCTGA AGTGCATCAA ACTGGCGGGG TTCAAATCTT TCGTCGACCC CACCACGGTG AACTTCCCCA GCAACATGGC GGCTGTCGTC GGCCCCAACG GGTGCGGCAA ATCCAATATT ATCGACGCCG TGCGCTGGGT CATGGGCGAA AGCTCGGCCA AGAACCTGCG CGGCGAGTCC ATGACCGACG TCATTTTCAA CGGCTCGACC AGCCGCAAGC CGGTCAGCCA GGCGAGCATC GAGCTGGTCT TCGACAACTC CGACGGCACG CTGGTCGGCG AGTACGCGGC CTACGCAGAA ATCTCCATTC GCCGCAAAGT CACCCGCGAC AGCCAGAACA GCTATTACCT GAACGGCACC AAGTGCCGTC GTCGCGACAT CACCGACATC TTCCTCGGTA CCGGCCTGGG ACCGCGCAGC TACTCGATCA TCGAGCAGGG CATGATCTCC AAGCTGATCG AAGCCAAGCC CGAGGACCTG CGCAACTTCA TCGAAGAAGC CGCCGGCATC TCCAAGTACA AGGAGCGCCG TCGGGAAACC GAAAACCGTA TCCGCCGTAC CCACGAAAAC CTCGCGCGCC TGACTGACCT TCGCGAAGAG CTCGAGCGCC AGCTGGAGCG CTTGCACCGC CAGGCTCAGG CTGCCGAGAA GTATCAGGAA TACAAAGCCG AAGAGCGCCA GTTGAAGGCG CAACTGTCAG CCCTGCGCTG GCAGGCATTG AATGAGCAAG TAGGTCAGCG CGAGGCGGTG ATCGGCAATC AGGAAGTCGG TTTCGAGGCA CTGGTGGCCG ATCAGCGCAG CGCCGATGCC AGCATCGAGC GCCTGCGCGA CGGGCATCAT GACCTGTCCG AGCGCTTCAA TCTGGTGCAG GGACGCTTCT ATTCGGTGGG TGGCGACATC GCCCGCGTCG AGCAGAGCAT TCAGCACGGT CAGCAGCGCC TGCGCCAGTT GCAGGATGAC CTGCGCGAAG CCGAGCGCGC CCGTCTGGAA ACCGAATCGC ACCTGGGACA CGACAGCACC TTGCTCGCCA CCCTGGGCGA AGAGCTGGAA ATGCTTGAGC CCGAGCAGGA AATGACCAGC GCCGCCGCCG AGGAATCGGC CATTGCGCTG GAAGACGCCG AGTCGGCGAT GCAGGGCTGG CAGGAGCAGT GGGACGTCTT CAACCAGCAG TCCGCCGAGC CACAGCGTCA GGCGCAGGTT CAGCAATCCC GTATTCAGCA ACTGGAACAG AGCATCGAGC GTCTGGCCGA GCGCCAGCGA CGTCTGGCCG AGGAACGTCA ATTGCTGACG GCCGACCCGG AAGACGCGGC CATTCTCGAG TTGAGCGAAG ACCTTGCGAC CCGAGACATG ACCCTCGAAG AACTGCACAT GGGTGAAGAG CAAACGGTCG AGCGTCTGGA GCAATTGCGC GAGGCCCTGC AGAACGCCAG TCACGCACAG CAGCAGGCCC AGGGCGAGTT GCAACGCCTC AACGGCCGAC TGGCATCACT GGAAGCCCTG CAACAGGCTG CGCTCGATCC GGATACCGGC ACCGCCGAAT GGCTGCGTGA TCAGCAATTG GCCGAACGCC CGCGCCTGGC CGAGGGGCTG AGCGTCGAGG CGGGCTGGGA GTTGGCAGTC GAAACTGTAT TGGGTGCCGA TTTGCAGGCG GTGCTGGTCG ATGACTTTGA CGGGCTCGAT CTGGCCAGCT TTCAGCAGGG CGATCTGCGC CTGCTCAGCG CCAGTGCCGA CACGGTCCGG GTGCCGGGCA GCTTGCTGGA AAAGGTCGAA AGCACGGTCG ATCTGTCGGC CTGGCTGGGT CAGGTGATGC CCGTCGAGAA TCTGGACGAA GCACTGGCGC GCCGCACGCA ACTGAGCGCC GGACAAAGCC TGATCAGCCG CGACGGTTAC TGGGTCGGCC GGCACTTCTT GCGGGTACGA CGTGCCAGCG AAGCGCAGAG TGGCGTGTTG GCGCGTGGTC AGGAATTGCA GCGGCTGGGG CTGGAACGCG ACGAGCGCGA AGCGACCCTG GCATCCCTTG AAGAGCAATT ACTGAGCCTG CGCGAGCAAC AATCGCAGCA GGAAGACGCC CGCGAGCAAC TGCGTCGTCG GGTGCAGGAC GAAACCCGTC AGCAAAGCGA ACTCAAGGCG CAGCTGTCGG CCGCCAGGGT CAAAGTCGAG CAGTTGACTC TGCGCCGCAC GCGTCTGGAC GAAGAGCTGG CCGAGCTGGG CGAGCAGCGC TCTGTGGAAC ATGAGCATCT GGGGGAATCG CGCCTGCAAC TGCAGGATGC GCTGGATTCG ATGGCGCTGG ATACCGAACA GCGAGAAGTG CTCCAGGCCC AGCGTGATGC GCTGCGCGAG CGTCTGGACC GAATACGTCA GGACGCGCGA CAACACAAGG ATCACAGCCA CCAGTTGGCC GTGCGTCTGG GCTCGATCAA GGCGCAATAC GATTCGACGC GTCAGGCGCT GGAGCGCCTG CGCATGCAGT CCGAAAGGCT GACGGAAAAA CGCGAACAAC TGAGCCTGAA CCTGGAGGAG GGCGAGGCGC CGCTTGAAGA GCTGCGTCTC AAGCTTGAAG AGCTGCTGGA GCGGCGCATG GTGGTCGATG ACGAAATGCG CATCGCCAAA AACGCACTCG AAGACGCCGA TCGTGAGTTG CGTGAAGCAG AGAAACGCCG TACTCAGGCC GAGCAGCAAT CGCAACTGCT GCGTGGTCAG CTCGAGCAGC AACGCCTGGA GTGGCAGGCG CTGAGCGTGC GCCGCACCGC GTTGCAGGAC CAGTTGCACG AAGACGGCTA CGACCTGCAC GGCGTGCTCG CCACCCTGAC ATCGGAAGCC AGCGAGCAGG CCGCCGAGCA GCAGCTGGAA AGCATCGCCG GGCGCATTCA GCGCCTGGGC GCGATCAACC TCGCCGCCAT CGACGAGTAT CAGCAGCAAT CCGGGCGCAA GCGTTATCTG GATGCGCAGG ACGCCGATCT GGTGGAGGCG CTCGACACGC TGGAAAACGT CATTCGCAAG ATCGACAAGG AAACCCGAAA CCGCTTCAAA GATACCTTCG ATCAGATAAA TAGCGGAATT CAGGCACTTT TCCCGAAAGT TTTCGGTGGT GGCTCCGCTT ATTTGGAACT GACAGGCGAA GATTTACTCG ATACAGGGGT GACAATCATG GCGCGTCCTC CTGGCAAGAA GAACAGCACC ATCCATTTGC TGTCGGGTGG GGAAAAAGCA CTGACGGCGC TTGCACTGGT TTTTGCCATC TTCAAGCTCA ATCCTGCACC GTTCTGCATG CTTGACGAGG TCGATGCACC ACTGGATGAC GCCAACGTGG GACGGTATGC GCGTTTGGTG AAAGAAATGT CACAAACTGT GCAGTTCATC TACATCACCC ACAACAAGAT CGCCATGGAA ATGGCCGATC AACTGATGGG GGTAACGATG CACGAGCCCG GCTGTTCAAG GCTTGTAGCG GTGGACGTCG AGCAGGCCAT GGCGTTGGTG GATGCTTGA
|
Protein sequence | MRLKCIKLAG FKSFVDPTTV NFPSNMAAVV GPNGCGKSNI IDAVRWVMGE SSAKNLRGES MTDVIFNGST SRKPVSQASI ELVFDNSDGT LVGEYAAYAE ISIRRKVTRD SQNSYYLNGT KCRRRDITDI FLGTGLGPRS YSIIEQGMIS KLIEAKPEDL RNFIEEAAGI SKYKERRRET ENRIRRTHEN LARLTDLREE LERQLERLHR QAQAAEKYQE YKAEERQLKA QLSALRWQAL NEQVGQREAV IGNQEVGFEA LVADQRSADA SIERLRDGHH DLSERFNLVQ GRFYSVGGDI ARVEQSIQHG QQRLRQLQDD LREAERARLE TESHLGHDST LLATLGEELE MLEPEQEMTS AAAEESAIAL EDAESAMQGW QEQWDVFNQQ SAEPQRQAQV QQSRIQQLEQ SIERLAERQR RLAEERQLLT ADPEDAAILE LSEDLATRDM TLEELHMGEE QTVERLEQLR EALQNASHAQ QQAQGELQRL NGRLASLEAL QQAALDPDTG TAEWLRDQQL AERPRLAEGL SVEAGWELAV ETVLGADLQA VLVDDFDGLD LASFQQGDLR LLSASADTVR VPGSLLEKVE STVDLSAWLG QVMPVENLDE ALARRTQLSA GQSLISRDGY WVGRHFLRVR RASEAQSGVL ARGQELQRLG LERDEREATL ASLEEQLLSL REQQSQQEDA REQLRRRVQD ETRQQSELKA QLSAARVKVE QLTLRRTRLD EELAELGEQR SVEHEHLGES RLQLQDALDS MALDTEQREV LQAQRDALRE RLDRIRQDAR QHKDHSHQLA VRLGSIKAQY DSTRQALERL RMQSERLTEK REQLSLNLEE GEAPLEELRL KLEELLERRM VVDDEMRIAK NALEDADREL REAEKRRTQA EQQSQLLRGQ LEQQRLEWQA LSVRRTALQD QLHEDGYDLH GVLATLTSEA SEQAAEQQLE SIAGRIQRLG AINLAAIDEY QQQSGRKRYL DAQDADLVEA LDTLENVIRK IDKETRNRFK DTFDQINSGI QALFPKVFGG GSAYLELTGE DLLDTGVTIM ARPPGKKNST IHLLSGGEKA LTALALVFAI FKLNPAPFCM LDEVDAPLDD ANVGRYARLV KEMSQTVQFI YITHNKIAME MADQLMGVTM HEPGCSRLVA VDVEQAMALV DA
|
| |