| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3649 |
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| Symbol | |
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| ID | 1185314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4109900 |
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| End bp | 4111024 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394997 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | NP_793424 |
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| Protein GI | 28870805 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGG ACATCATCAG ATTTTTCACA GACTCAGAAT TTCTGGGTAT TTCGCTCGCT
AACTGGATAG TTGCGGTTTT TGTCTCGACC ATGAGCTTTT TGCTGGTCAG GGGTGTTATC
GGCTTCGTGC TGCGAAAGAT GCGCGCGCAG CCAGTCACGC CCAATCGGCA TATGAGCTAC
ATCGTTGTGC AGGTGCTGTC TGGCACCAGT AATACGCTGT TGCTGCTGGC GTCGATTCTG
GTCGGCATCG GTATGCTTGA TCTGCCGGAG CGTTGGCTTG GGCGAGTGAG CAGTTTGTGG
TTCGTGGTCG CGGCGTTGCA GGTCGGGCTG TGGGCGAACC GGGCAATCGC CCTGGCGTTG
CACCGCTATT TCGTTCGCCA TAACACCGAT GAAACCTTTC AGGGCAGTGC CTTGACGACC
TTGAGTCTAT GGGGCGCGAA GGTGTTGTTG TGGGCAACGG TGGTGATGGC GATGCTGTCG
AACGTCGGGG TCAATATCAC CGCGTTTGTG GCCAGTCTCG GGGTTGGCGG TATTGCAGTG
GCGCTGGCGG TGCAGAACAT CCTCGGTGAC GTCTTTGCCT CGCTGTCGAT TGCAGTGGAC
AAGCCGTTCG AGATCGGCGA TTTCATCGTC GTCGGGGCGC TAGCGGGTAC GGTCGAGCAC
GTCGGCCTGA AGACCACGCG CATTCGCAGC CTGGGTGGCG AACAGATCGT GATGGCTAAC
GCAGACATGA TCAACAGCAC CATTCAGAAC TACAAACGCT TGCAGGAACG ACGCATCGTC
TTTGACTTCA GGCTCACCTA TGACTGCTCT GCCGATCAGG TGCGCGAAGT GCCGAAGAAG
GTCGAGAAGA TCATCAACGC GCAGAAGCTG GCGCGCTTCG ACCGCTCGCA TTTCCGTGGC
TTTGGCGAGA CGTCGCTGGA GTTCGAGACT GTCTTTATCG TTCTCGACCC CAGCTATAAC
GTCTATATGG ATGTGCAGCA GGCGATCAAT CTCGAGATCA TGGAAGCCTT TGCCGAGATG
GATGTGCGTT TCGCATTCCC GTCCCGCACG GTGTACGTGG CGTCCTTGCC ACCTGTGAAA
ACCTCACGGC ACACCGCGCT GGAAGCTGCC GACGCTAACG CGTAA
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| Protein sequence | MEQDIIRFFT DSEFLGISLA NWIVAVFVST MSFLLVRGVI GFVLRKMRAQ PVTPNRHMSY
IVVQVLSGTS NTLLLLASIL VGIGMLDLPE RWLGRVSSLW FVVAALQVGL WANRAIALAL
HRYFVRHNTD ETFQGSALTT LSLWGAKVLL WATVVMAMLS NVGVNITAFV ASLGVGGIAV
ALAVQNILGD VFASLSIAVD KPFEIGDFIV VGALAGTVEH VGLKTTRIRS LGGEQIVMAN
ADMINSTIQN YKRLQERRIV FDFRLTYDCS ADQVREVPKK VEKIINAQKL ARFDRSHFRG
FGETSLEFET VFIVLDPSYN VYMDVQQAIN LEIMEAFAEM DVRFAFPSRT VYVASLPPVK
TSRHTALEAA DANA
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