Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3632 |
Symbol | ccmD |
ID | 1185297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4093021 |
End bp | 4093197 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394981 |
Product | heme exporter protein CcmD |
Protein accession | NP_793408 |
Protein GI | 28870789 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCTTCG AGTCATTCAG CGATTTTCTC GCAATGGGCC GCCACGGGCT ATTTGTCTGG TCGGCTTACG GCCTGTGTCT GCTGGTGCTG CTGATCAACG TGGCGTTGCC GGTGCTGGCG CGGCGGCGTT ATCTGAAGCA ACAGGCGCAA CGCTTGAAGC GGGAGAGCCG GCCGTGA
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Protein sequence | MSFESFSDFL AMGRHGLFVW SAYGLCLLVL LINVALPVLA RRRYLKQQAQ RLKRESRP
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