| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3617 |
|---|
| Symbol | |
|---|
| ID | 1185282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4079962 |
|---|
| End bp | 4080414 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637394967 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | NP_793394 |
|---|
| Protein GI | 28870775 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.821242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCG ATTCATTGCA TCGGGCGGTC AGTAGCGGTC TGGTAGCAGC GTCTCGCCAA
TGGCGACGCA TCTGTCAGAA CACGCTGGTC ACCTACGGGA TTTCCGAAGC GTGCGCAGGG
CCTTTATTGG CGATTGCGCG CTTGGGTGAC GGTGTCCATC AGGTCAAAGT GGCGCAAGCC
GCCGGCATGG AAAGCCCGAC GCTGGTGCGC CTGCTCGATC AGCTGTGCAA GGCCGGCATC
GTGTGCCGCA GCGAAGACCC CAACGACCGC CGCGCCAAGG CCCTGAGCCT GACCGACAAG
GGCCGCACGC TGGCAGGTTC CATCGAACTG GAACTGACCC GGCTGCGCGC CGATGTCCTC
AAAGGTCTGC AGCTTTCTGA CCTGGAAGCC ACATTGCGTG TGTTCCAGGC GTTCGCCGAG
GCGGCGCACA CTGAATTGGG AGGATCGGCT TGA
|
|---|
| Protein sequence | MPVDSLHRAV SSGLVAASRQ WRRICQNTLV TYGISEACAG PLLAIARLGD GVHQVKVAQA
AGMESPTLVR LLDQLCKAGI VCRSEDPNDR RAKALSLTDK GRTLAGSIEL ELTRLRADVL
KGLQLSDLEA TLRVFQAFAE AAHTELGGSA
|
|---|
| |