Gene PSPTO_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3596 
Symbol 
ID1185261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4056266 
End bp4057120 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID637394948 
Producthypothetical protein 
Protein accessionNP_793375 
Protein GI28870756 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTTC CGTTTTTGAT CATGCTGCGC GAAGGCATCG AAGCCGCCCT CATTGTTGGC 
ATCATCGCCA GCTACCTGAA ACAGACCGGC CGCGGCGAGT GGATGCCTGC GGTGTGGGTT
GGCGTGTTCC TCGCCGCCGC CCTTTCGCTG TTCGTCGGTG GCGGGCTGGA ATTGATGAGC
GCTGAATTCC CGCAAAAGCA GCAGGAATTG TTCGAAGGCA TTGTCGGCCT TATTGCCGTG
GGCATTCTCA GTTCGATGGT GTTCTGGATG CGCAAAGTGG CGCGCTCGAT CAAGCACGCG
CTGCACGAAT CACTGGACGC CGCCCTCGCC GGCTCGAAAA ACCAGACCTA CGCGCTGATC
GCCATGGTGT TCTTCGCCGT GGCCCGCGAA GGGCTGGAAA CCGTGTTTTT TCTGCTTGCC
GTGTTTCAAC AGAGCGAAGG CTCAAGTGCG CCACTCGGTG CCCTGCTCGG CCTGTTGCTG
GCCGTCGGTT TCGGCGTGGC TATCTACAGC GGCAGCATGC GCCTGAACCT GGGCCTGTTT
TTCCGCTGGA CCGGGCTGTT CATTCTGGTC GTGGCGGCGG GCATCCTGGC CAACTCTGTG
CAGGCGCTGC ATGAAGCCGG CGTGTGGAAT CACCTGCAAG GCGTGGTGTT CGACATCAGC
GCGCTGCTGC CGATGGACGG CCCGGCAGGC TCGGTACTGG CCGGCATGTT CGGTTATCAG
GATGCGCCGA CGGTCAGCAC CCTGAGCGTT TATCTGATCT ACCTGATCGG GGCACTGGTG
CTGTTTTTCA TGCCGCACAC CCCGAAGGCC GGCAAGCCGG TCCAGCCACA CCCATCTTCT
GTTACGAACG AATAA
 
Protein sequence
MLVPFLIMLR EGIEAALIVG IIASYLKQTG RGEWMPAVWV GVFLAAALSL FVGGGLELMS 
AEFPQKQQEL FEGIVGLIAV GILSSMVFWM RKVARSIKHA LHESLDAALA GSKNQTYALI
AMVFFAVARE GLETVFFLLA VFQQSEGSSA PLGALLGLLL AVGFGVAIYS GSMRLNLGLF
FRWTGLFILV VAAGILANSV QALHEAGVWN HLQGVVFDIS ALLPMDGPAG SVLAGMFGYQ
DAPTVSTLSV YLIYLIGALV LFFMPHTPKA GKPVQPHPSS VTNE