| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3583 |
|---|
| Symbol | |
|---|
| ID | 1185248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4042152 |
|---|
| End bp | 4042706 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394935 |
|---|
| Product | ankyrin domain protein |
|---|
| Protein accession | NP_793362 |
|---|
| Protein GI | 28870743 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.381632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATC TCATCTACGG TCTGTTCCTG TTTGGCGCCA TGGCCAACGC CGCAGAGCCC
GCCGCCACGC CTGATCTGAC CGCCGAACAG ACTGCCAGCC AACTGCGCAC ACTGTTTTTC
GACGCGTCCC GTGAAGGCAA CAACCCAATG CTCGATACCT TCATCGAGGC CCATTACGAC
CTCAATGTTC GTGACGAACA AGGCTATACC GGCCTGATTC TGGCGGCCTA CCACGGTCAC
CAAGACTCGG TCACCCGCCT GATCGACGCA GGCGCAGACC CTTGCGCGAA AGACAATCGC
GGCAACACGG CGTTAATGGG GGCTATTTTC AAAGGTGAAC TGAGCATTGC CAAACAATTG
GTAAAAGCCG ACTGCGGCCC CGATCTGACC AACAACGCAG GGCAGACGGC AGCCATGTAC
GCAGCCCTGT TCAAACGCAC TGAAGTGCTC AAGGCGTTGA CCGACAAAGG CGCCGACCTG
AGCATCCGCG ACAGCATGGG CAATGACGTG CAGGGTTTGT CCAAGGGTGA GTTTCAGGCG
CTGCCAAACC GCTGA
|
|---|
| Protein sequence | MKNLIYGLFL FGAMANAAEP AATPDLTAEQ TASQLRTLFF DASREGNNPM LDTFIEAHYD
LNVRDEQGYT GLILAAYHGH QDSVTRLIDA GADPCAKDNR GNTALMGAIF KGELSIAKQL
VKADCGPDLT NNAGQTAAMY AALFKRTEVL KALTDKGADL SIRDSMGNDV QGLSKGEFQA
LPNR
|
|---|
| |