| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3577 |
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| Symbol | |
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| ID | 1185242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4034169 |
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| End bp | 4035797 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394929 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_793356 |
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| Protein GI | 28870737 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAA GAAAACTCAA CCTCGCCCCG CGTTCGGCTT TATGTTTCGG TATTTTCTGT
CTGATGATCG TTGCATTGGG TGTATTGGCT CTGCGTCAGG CAGCACTTCT CAACACCGCA
GAAAAATTCA TTGAAGAAAA CGTTCTGCCC AGCGTGAAGC TGCTGGGTTC TCTGGACCGG
GAATTTGTCG GCATCAGGGG CAACAACGCC CGCTTGCGCA ACCCGCTTGA GCCGCAGGAT
CGCAAGACCA AAGCACTCAG CGACATTCAG CAGTCTCGCG CGCTGATTGC AGGCTTTTCG
GATGCACTCG GCAAGTTGAT CGTGACCCCT CAAGGGCGTC AGGCATTCGA CGAGCTCAAC
AAAGCCATCA GCGATTATCA GACTGCCCAG AATCATTACT TGGCTTCCGT TGCCGCAGGA
AATTTCGAGG AGGCAGTCAC CATCTCCAAT GGCGAGATGA AAAACGCGGC GGACCAGGTT
GAAAACACGC TCAAGAAACT CATCGGCATC AATGATGGCA AAGCAGAAAG AGCGGGAAAT
CAGGCCGACG ACGCCTACCA GCAAACCCTG TGGATGGTGG GTATTTTTAT CGCTGTCGGC
GTAATCGCTA CGTTGTTGCT CGCCTGGCTG TATACCCGCA GCCTGACCGG CCCGATCAAT
GAGTCGCTGA ACATCGCGCA ACGCATCGCC GCCAATGATC TGAGCAAAGA CATTCCACAC
AGCGGCAGCG ATGAAGCGGC CAGGCTGATT GCCGCCCTCG CCGCCATGCA AACCAATCTG
CGTGGCGCGC TGACGCTGAT TGGTGATTCC TCCACTCAAC TGGCCGCAAC GTCGGAAGAA
ATGCATGCGG TGACTGAAGA TGCTTCGCGG ACCATTCAGC GCCAGAGCAA CGAAATCGAG
ATGGCCGCTA CCGCTGTCAA TCAGATGAGC GCTGCGGTCG AGGAAGTGGC CAGCAACGCC
GCATCGGCCT CCGAAGTGAC ATCGCAATCG AGCACAGCGG CCATGGCCGG GCGCGCACAG
GTCGATGAAA CGGTCACGGC CATCAACCTG ATGGTGTCCA AAGTGCAGCT CACGTCCACC
GAGGTACAAG GTCTGGCGGT CATGGCAACG GACATCAGCA AGGTACTGGA TGTGATCCGC
GCCATCGCCG AGCAAACCAA CCTGCTGGCA CTCAACGCCG CCATTGAAGC AGCCCGCGCT
GGCGAAGCCG GACGCGGTTT TGCGGTGGTC GCCGACGAAG TTCGTGCACT GGCGCACCGT
ACGCAGCAAT CGACCCGTGA AATCGAACAG ATGGTCGGTT CGATTCAGAC CGGCACCGGC
AACGCTGTCA CCGCGATGGA GCAGACCAGC GTGCAGGCGT ACAAGACGCT GGAAATGGCC
AACGGCGCAG GCAAGGCACT GCTCGAAATC ACTGAATCCA TCAGTCAGAT CAACGAGCGC
AACCTGATGA TCGCCACCGC CGCTGAAGAA CAGGCTCAGG TGGCGCGTGA GGTGGACAGA
AGCCTGGTCA GCATCCGTGA CCTGTCCAGT CAGACGTCCG AGGGTTCGAA CCAGACCGCC
ATCGCCACCG CCGAGTTGTC GACGCTGGCC GCTGGCCTGA ACCGCCTCAC CAAGCAGTTC
CGCGTTTAA
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| Protein sequence | MILRKLNLAP RSALCFGIFC LMIVALGVLA LRQAALLNTA EKFIEENVLP SVKLLGSLDR
EFVGIRGNNA RLRNPLEPQD RKTKALSDIQ QSRALIAGFS DALGKLIVTP QGRQAFDELN
KAISDYQTAQ NHYLASVAAG NFEEAVTISN GEMKNAADQV ENTLKKLIGI NDGKAERAGN
QADDAYQQTL WMVGIFIAVG VIATLLLAWL YTRSLTGPIN ESLNIAQRIA ANDLSKDIPH
SGSDEAARLI AALAAMQTNL RGALTLIGDS STQLAATSEE MHAVTEDASR TIQRQSNEIE
MAATAVNQMS AAVEEVASNA ASASEVTSQS STAAMAGRAQ VDETVTAINL MVSKVQLTST
EVQGLAVMAT DISKVLDVIR AIAEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRALAHR
TQQSTREIEQ MVGSIQTGTG NAVTAMEQTS VQAYKTLEMA NGAGKALLEI TESISQINER
NLMIATAAEE QAQVAREVDR SLVSIRDLSS QTSEGSNQTA IATAELSTLA AGLNRLTKQF
RV
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