| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3565 |
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| Symbol | |
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| ID | 1185230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4022920 |
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| End bp | 4024272 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394917 |
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| Product | gluconate permease |
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| Protein accession | NP_793344 |
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| Protein GI | 28870725 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0134143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTA TGACCCATGA GACGTTCCTG CTCGTCGATG CGTTGGTGAC CATCGTCGGC
CTTGTGCTAC TGATCACCAC CTTCAAGGTT CACCCTTTCG TCGCGCTGAC ACTGGCGGCA
GGCTTTCTTG GCCTGACGTC GGGAATGCCA GTAGAAAAAG TCATGAAGTC CTTCCAGGAG
GGCTTCGGCG GCGTGCTGGG TTTCGTCGGT ATCATCCTTG GCCTGGGCAC CATGCTCGGC
AAGCTGATGG CCGATTCGGG GGGTGCGGAC CAGATTGCGC AGACCCTGAT CCGCACCTTT
GGTAAACAGA AAGTGCATTG GGCAATGATG TTCTCCGCGT TTCTGGTGGG CATCCCGCTG
TTCTTCGAGA TCGGTTTTGT GCTGCTGATC CCGCTGGTGT TCATCGTCGC CCGTCGTACC
GGCGTGTCCA TCGTCAAGAT CGGCATCCCG TTGCTGGCTG GCCTGTCGGC CGTACACGGC
CTGGTTCCAC CGCACCCGGG CCCGCTGCTG GCCATCGGCA TTTTTGGTGC TGATATCGGC
AAGACCATTT TTTATGGCCT GATCGTCGCG CTGCCAACCG CCATCATCGC GGGTCCCATC
TACGGCAACT GGATCTCCAA GCGCATCCCC GGTACGCCGT CGCAGGAGTT GATGGACCAG
ATCGCCAAGG AGTCGAGCAC TGAAAACCTG CCGGGCTTTG GCATCACGCT GATCACCATC
CTGCTGCCTG TGTTCCTGAT GCTGCTCAAG ACCTTTGCTG ACGTGGTGTT GCCGGAAAAC
AACATGTTCC GCATCTGGAT GGACCTGATC GGTCACCCGA TCACTGCCCT GCTGGCAGCG
CTGTTGCTGG CGTTCTACAC CTTTGGTGCG GCACGCGGCT TTGACCGCAC CAAAATCATG
AAACTGCTGG ACCAGAGCCT TGCACCGGTT GCAGCCATCG TCCTGATCGT CGGCGCAGGT
GGCGGCTTCA AGCAGATGCT GGTGGCCAGC GGTGTGGGTG ATGTCATCGG GCACATGGCC
GTACAGGCAC AGATCAACCC GATCATGCTG GCTTGGCTGG TGGCGGCGGT GATTCGCATT
GCGACTGGTT CGGCTACCGT GGCGACCATT ACCGGTGCAG GGATTGTGGC GCCAGTGGTT
GGCCTGATTC CAGGCGTCAA TCGCGAGCTG CTGGTGCTGG CCACGGGTGC CGGCTCGTTG
ATCCTGTCGC ACGTCAACGA TGCCGGTTTC TGGCTGGTTA AACAGTATTT CAACATGACC
GTTGCCGAAA CGTTCAAGAC CTGGACAGTG ATGGAAACCA TCCTGTCGGT GGTCGGCCTG
ATCTTCATCA TGCTGTTGTC GATGGCACTT TAA
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| Protein sequence | MFGMTHETFL LVDALVTIVG LVLLITTFKV HPFVALTLAA GFLGLTSGMP VEKVMKSFQE
GFGGVLGFVG IILGLGTMLG KLMADSGGAD QIAQTLIRTF GKQKVHWAMM FSAFLVGIPL
FFEIGFVLLI PLVFIVARRT GVSIVKIGIP LLAGLSAVHG LVPPHPGPLL AIGIFGADIG
KTIFYGLIVA LPTAIIAGPI YGNWISKRIP GTPSQELMDQ IAKESSTENL PGFGITLITI
LLPVFLMLLK TFADVVLPEN NMFRIWMDLI GHPITALLAA LLLAFYTFGA ARGFDRTKIM
KLLDQSLAPV AAIVLIVGAG GGFKQMLVAS GVGDVIGHMA VQAQINPIML AWLVAAVIRI
ATGSATVATI TGAGIVAPVV GLIPGVNREL LVLATGAGSL ILSHVNDAGF WLVKQYFNMT
VAETFKTWTV METILSVVGL IFIMLLSMAL
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