| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3551 |
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| Symbol | hmgA |
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| ID | 1185216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4007204 |
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| End bp | 4008508 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394904 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | NP_793331 |
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| Protein GI | 28870712 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.518718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTC ATTCCAGCTT CGAAGCGTTG GCCTATCAAT CGGGCTTCGC CAACCAGTTC
AGCAGCGAGG CGCTGCCTGG CGCCTTGCCC ATGGGCCAGA ACTCGCCGCA GAAACACCCC
CTGGGCCTGT ATGCCGAGCA GTTCTCAGGG ACCGCTTTCA CCGTCGCCCG CAACGAGGCC
CGACGGACCT GGTTGTACCG CATCAAACCG TCGGCGGCAC ATCCGCGCTA TCAACGCATG
GACCGGCAAA TCACTGGCCG TGAACAAGGC CCGATCAACC CCAATCGACT GCGCTGGAAC
GCGTTCGATA TCCCGGCCGA GCCCGTCGAT TTCATTGACG GGCTGATTGC GCTGGCCAGC
ACTTCAGCGG CAGATCAGGC CGAGGGCGTC AGCGTTTATG TGTACGCAGC CAATACGTCG
ATGCAGCGCG CGTTTTTCAG CGCTGACGGG GAATGGTTGA TCGTGCCGCA ACAGGGGCGA
CTCAGAATCA TCACCGAGAT GGGTGTGCTG GACATCGGCC CGCTGGAAAT CGCCGTGCTG
CCACGCGGCC TGAAATTCAG CGTGCAACTG CTCGACGGCA GCGCTCGGGG TTACCTCTGC
GAGAACCACG GTGGTGTCTT GCGCCTGCCG GAACTGGGGC CGATCGGTAG CAATGGTCTG
GCCAACCCGC GTGATTTTCT GACGCCCGTG GCCTGGTTTG AAGAGCGTGA CGAGCCTGTG
CAACTGGTGC AGAAATTTCT CGGCGAACTG TGGACGACGC AACTGCAACA CTCGCCATTC
GATGTGGTGG GCTGGCATGG CAATAACGTG CCGTACACGT ACGATCTGCG GCGTTTTAAT
ACGATTGGCA CGGTCAGCTA CGATCATCCC GACCCGTCGA TTTTCACCGT ACTGACCTCG
CCAGGCGCCG TCCACGGTCA GGCCAACATC GATTTCGTGA TCTTCCCGCC ACGCTGGATG
GTCGCTGAAA ACACCTTCAG GCCGCCGTGG TTCCATCGCA ACCTGATGAA CGAATTCATG
GGTCTGATCG ACGGCGCCTA CGACGCCAAG GCTGAGGGTT TCATGCCGGG TGGCTCGTCG
CTGCACAACT GCATGAGCGC CCACGGCCCG GACAATATCA CCGCGGAAAA AGCCATTGCT
GCGGACCTGA AACCGCACAA GATCGAAAAC ACCATGGCGT TCATGTTCGA GACCGGCAAA
GTGCTGCGCC CCAGCCTGCA TGCGCTGGCC TGCCCGCAGT TGCAGGCCGA TTACGACGCC
TGCTGGAACG GCATGGCCAG AACTTTCAAC AAGGAATCAT CCTGA
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| Protein sequence | MAIHSSFEAL AYQSGFANQF SSEALPGALP MGQNSPQKHP LGLYAEQFSG TAFTVARNEA
RRTWLYRIKP SAAHPRYQRM DRQITGREQG PINPNRLRWN AFDIPAEPVD FIDGLIALAS
TSAADQAEGV SVYVYAANTS MQRAFFSADG EWLIVPQQGR LRIITEMGVL DIGPLEIAVL
PRGLKFSVQL LDGSARGYLC ENHGGVLRLP ELGPIGSNGL ANPRDFLTPV AWFEERDEPV
QLVQKFLGEL WTTQLQHSPF DVVGWHGNNV PYTYDLRRFN TIGTVSYDHP DPSIFTVLTS
PGAVHGQANI DFVIFPPRWM VAENTFRPPW FHRNLMNEFM GLIDGAYDAK AEGFMPGGSS
LHNCMSAHGP DNITAEKAIA ADLKPHKIEN TMAFMFETGK VLRPSLHALA CPQLQADYDA
CWNGMARTFN KESS
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