Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3530 |
Symbol | |
ID | 1185195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3983868 |
End bp | 3985325 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637394883 |
Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PslB |
Protein accession | NP_793310 |
Protein GI | 28870691 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG0836] Mannose-1-phosphate guanylyltransferase |
TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.13628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCC TCATCCCCTG CATTATCGCC GGCGGCTCCG GGACACGCTT GTGGCCCGTA TCGCGCGAAG CCATGCCCAA ACCGTTCATG CGTCTGCCCG ATGGCGAAAG TCTGCTGCAG AAAACTTTTC TGCGTGCCGC CGGCCTGCCT GGCGTAGACC GCTTGCTGAC CGTCACCAAC CGGGAAGTGT ATTTCCGCAC GGTGGACGAC TATCGGCTGC TGAACAAAAG CCATGCGCGT CTGGATTTCA TCCTTGAGCC CTTCGGCCGC AATACCGCAG CGGCCATTGC CGCCGCGGCG CTGCATGTCA GCACGCTGTA TGGCGACGAT GCGCAATTGC TGGTGCTGCC GGCCGATCAC CTGATCACTG ATGTAGCGGC CTTTTCCAGG GCGGTGGCAG CCGCCCAGAC ACTGGCCGCC GAGGGCTGGC TGGTCACGTT CGGTATCGTG CCGACCGCAC CGGAAACCGG TTTTGGCTAC ATCGAGAAAG GCCAGGCGCT CAACGCCGAG GCCTGTCAGG TCGCCCGCTT TGTCGAAAAA CCCGATGCGG CCGTTGCGCA GGGCTATCTG CAGAGCGGTC TGCACCTCTG GAACGCCGGC ATGTTCTGCA TGCGCGCCGA CGCCGTGTTG CGCGAATTGC AGACCCACGC GCCCGATGTG CTCAGCGTGG TCAGCACGTG CATGGCGGTA AGCCAGCGCA AGGAAGGCGG TCGCGAACTG CAGATCGAAC TCGACAGTGA GTCGTTTGCC CTGACCCCGG ACATTTCCAT CGACTACGCG CTGATGGAGC GTTCCGACAA GGTTGCCGTG GTGCCCTGCC AGCTTGGCTG GAGCGACATC GGCTCGTGGC AGGCGGTGCG CGAGCTGTCT CCCGTCGATG CGCAGGGCAA TCATTGCAAC GGTGAAACGG TGCTGCATGA CGTCAGTAAC TGTTACATCG ACTCACCCAA ACGGCTGGTC GGCGCTGTCG GTCTCGATAA CCTGATCATC ATCGACACCC CCGACGCCTT GCTGATCGCA GACGGTCGTC GCAGCCAGGA CGTCAAGATC ATTGCCCAGG AACTCAAGCG CCAGGGCCAT GATGCTTACC GCCTGCACCG CACCGTTACC CGCCCCTGGG GCACCTACAC CGTGCTCGAA GAAGGCAAGC GCTTCAAGAT CAAACGCATC GTGGTTCGTC CCCAGGCGTC CTTGTCGTTG CAGATGCACC ATCACCGCAG CGAACACTGG ATCGTGGTCA GCGGCATGGC CACGGTGACC AACGGCGAGC GCGAATTCAT GCTCGACACC AACGAATCGA CGTTCATCAA GCCGGGCTTC ACGCACCGGC TGGTCAACCC CGGCGTCATC GATCTGGTGA TGATCGAGGT GCAGAGCGGC GAGTACCTGG GTGAAGACGA CATCGTGCGG TTTACCGACA TCTACGGACG GGTGCCTGAA AAGGCCGTGA AGAGCTGA
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Protein sequence | MSILIPCIIA GGSGTRLWPV SREAMPKPFM RLPDGESLLQ KTFLRAAGLP GVDRLLTVTN REVYFRTVDD YRLLNKSHAR LDFILEPFGR NTAAAIAAAA LHVSTLYGDD AQLLVLPADH LITDVAAFSR AVAAAQTLAA EGWLVTFGIV PTAPETGFGY IEKGQALNAE ACQVARFVEK PDAAVAQGYL QSGLHLWNAG MFCMRADAVL RELQTHAPDV LSVVSTCMAV SQRKEGGREL QIELDSESFA LTPDISIDYA LMERSDKVAV VPCQLGWSDI GSWQAVRELS PVDAQGNHCN GETVLHDVSN CYIDSPKRLV GAVGLDNLII IDTPDALLIA DGRRSQDVKI IAQELKRQGH DAYRLHRTVT RPWGTYTVLE EGKRFKIKRI VVRPQASLSL QMHHHRSEHW IVVSGMATVT NGEREFMLDT NESTFIKPGF THRLVNPGVI DLVMIEVQSG EYLGEDDIVR FTDIYGRVPE KAVKS
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