Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3499 |
Symbol | |
ID | 1185164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3950599 |
End bp | 3951504 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394852 |
Product | iolE protein |
Protein accession | NP_793279 |
Protein GI | 28870660 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTTT CAGCTTCCAC GCCCAAGATC CGCATCGGTA TTAACCCGAT CTCCTGGAGC AACGACGACT TGCCGGCCCT CGGCGGCGAA ACACCGTTGA GCACTGCCCT GAGCGAAGGC AAGGACATCG GTTACGAAGG TTTCGAGCTC AACGGCAAGT TCCCCAAGGA TGCCAAGGGC GTCGGCGATG TGCTGCGACC TTACGGCCTC GCGCTGGTCT CCGGCTGGTA TTCAAGCCGT CTGGCGCAGC GCTCGGTGGC CGAGGAAATC GAAGCCATTA CCCCGCACGT GCAGTTGCTC GCCGAGAACG GCGCTTCGGT GCTGGTGTAC GGCGAAGTGG CCGACTCCAT TCAGGGCCAG CGCATCCCGC TGGTCGAACG ACCGCGCTTT CACAGCGATG CGGCGTGGCG TGAGTACGCC GAAAAACTCA CCGAACTGGC GCGCTTCACC CTGTCCCGTG GCGTGCGTCT GGCGTATCAC CATCACATGG GCGCTTACGT CGAATCGCCT CAGGACATCG ACAAGCTGAT GGCGTTGACC GGCAACGAGG TCGGGCTGCT GTTCGATTCG GGGCATTGCT ATATGGGCGG CGGCGAGCCT TTGCAGGTGC TGGGCAAACA CATCGAGCGC GTTTGCCACG TGCATTTCAA GGACGTGCGC AAACCTGTGG TGCAACTGGC GCGCAACAAT CTCTGGAGTT TTCCGGACTG CATCATCAAT GGCACGTTCA CGGTGCCCGG CGACGGCGAC ATCGATTTTT CGGCACTGCT CAAGGTGTTG TTGCAGGCCG ACTACAGCGG CTGGCTGGTG GTCGAGGCCG AACAGGACCC GGCGGTAGCG CCCAGTTATG TGTATGCCAA AAAAGGCTAC GACACGCTGC GCCAACTGCT GGCCGATGCG CGATAG
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Protein sequence | MPVSASTPKI RIGINPISWS NDDLPALGGE TPLSTALSEG KDIGYEGFEL NGKFPKDAKG VGDVLRPYGL ALVSGWYSSR LAQRSVAEEI EAITPHVQLL AENGASVLVY GEVADSIQGQ RIPLVERPRF HSDAAWREYA EKLTELARFT LSRGVRLAYH HHMGAYVESP QDIDKLMALT GNEVGLLFDS GHCYMGGGEP LQVLGKHIER VCHVHFKDVR KPVVQLARNN LWSFPDCIIN GTFTVPGDGD IDFSALLKVL LQADYSGWLV VEAEQDPAVA PSYVYAKKGY DTLRQLLADA R
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