Gene PSPTO_3420 details

Gene Information

• Locus tag: PSPTO_3420
• ID: 1185080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 3856821
• End bp: 3857420
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637394771
• Product: hypothetical protein
• Protein accession: NP_793203
• Protein GI: 28870584

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00999602
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGGACCC TTTCAAGCCA CGCGGCAAAT GTATCACCAC TACATGCTGC GCGGCACTGG 
CAACTTACAA GGATTAATGC CATGAGCCGA ATTGCTCTGA GTTGTGTTGA ACGGGCGCAG 
CGGGAGATCC TGCCGCTCGA TCTGGCGCTT TACCATGCTG CAAGGGACTA CCCTGGCGGC 
GCTGCTGCAA TTGCTGTCAC CACGGGCAGA AACCCCACCA CCCTGCAACA CAAGCTTTCA 
CCGACTCACC CGAGCCACAC AGTCAACATT CAAGAGTTCG GTGAGATCCT GGAGCTTACC 
AAGGACCGCC GTATTCTGGA CGCAGTGCAT GCCTTGGTCG GTGATACGAC TTGGCAGGAG 
TTGGCAGAGG CTTATACCAA CGACATGCCA GAGACGTTGA CCACCGGCAT TGCAGAATAC 
TTCCATCAGG TCGCCAATCT TGCCGAGACG TGGGCGAAGA GTATCGGCGA TGGTGTCGTG 
AGCGATCAGG AACTGGCTGA GATACGTCTG CAGGTGTTCC GAGGCATTCA AGGCTTGCTC 
GGGTTGTTCA ACCGCGCCTC CTACGTCAAT CAGACGACGC GGGGTACTGA CCATGGCTGA 

 

Protein sequence

MWTLSSHAAN VSPLHAARHW QLTRINAMSR IALSCVERAQ REILPLDLAL YHAARDYPGG 
AAAIAVTTGR NPTTLQHKLS PTHPSHTVNI QEFGEILELT KDRRILDAVH ALVGDTTWQE 
LAEAYTNDMP ETLTTGIAEY FHQVANLAET WAKSIGDGVV SDQELAEIRL QVFRGIQGLL 
GLFNRASYVN QTTRGTDHG