| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3418 |
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| Symbol | |
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| ID | 1185078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3854392 |
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| End bp | 3856611 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394769 |
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| Product | DNA primase domain protein |
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| Protein accession | NP_793201 |
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| Protein GI | 28870582 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria
[COG5545] Predicted P-loop ATPase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0205684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATG AGGTGCTGGG GCAATTCGCT GACTACGGCC TTGAGCCTGC TCAACCGTTG
GTGTTCGGCA AGTTAACCCG TTGCAAGACA TCCCAGGACA AGGGAAAGGA AAAGAATGGT
TGGTACGTCA TTCACGAGCA TCGGACTGAA AAGAACGAGT CGCTGATCTT CGGTAGTTTT
GGTGACTGGC GTTCGGGTGA GTCGCAGAAG ATCAAGGTGA AAACTGGTCG AATGTCGCCT
GAAGAGCGCG AGGTCATGCG CGTTCGCCAA GAGGACGCGA AGCGGCGCGC AGCCGAGATC
GCCGCTAATG CTTCCCGTCG TGCGGCCAGT CGGGCGACGG GTATGTTCAA ACGCATGCCT
GATAAAGGCA AAAGCGCCTA TTTGGATCGC AAGCAGATCG TGGGGTTTCG TGTTCGTTAC
GCGCCGCGTT CAGGTGCTGT GCTGGTCCCG ATGAGCAATG CCCGCGATCA GATAGTCGGC
CTGCAAGTGA TCTACCCGGA AAAGCAACAG GATACCGGGC GTGACAAATC CTACTGGCCC
TACGGCATGT CAAAGGAAGG TGCGTTTCAT TTGATCGGCC CTGAGCCTGA GCCGGGTGAG
CCGTTACTGA TCTGTGAGGG ATACGCCACT GGCGCTAGCC TGCACATGGC GACTTCATAC
GGAGTCGCCA TTGCTTTTGA TGCGGGCAAC CTGCTCGCCG TCGCCAAGCT GATGCGTGAC
CGTCTTCCCG GTCGACCGAT AATCATCTGC CGCGACGATG ACTGGAAGAC CAAACGCCCG
AATGGGCAGC TTTGGAACCC GGGCGAGGAA AAGGCTACCA ACGCCGCCCT GATCGTTGGT
GGTCAGGTGG TTGCGCCTAT CTTCTCGGTT GAGCGTCATG ACAAATGGAC TGACTTCAAT
GATCTACATG TCGCCGAGGG TTTAGAGGCC GTCCGCCGTC AGGTGTTAGC GGTCGTCAGG
CCCCCTGCAG CAGGTGGTTG GAAAGACCAG TTGGCACGCA GTGAGAACGG CGCGCTCATT
GCCCATATGC AGAATATCGA GCTGATACTC GGCAACGACG AACGCTGGGC TGGTGTCATC
AGCTTCAGTG CCTTCAGTTC CAAGATCGTC AAGTTGCGGG CCGCGCCTTA CGGCGGTGGT
ACTGGCGACT GGGCTGATAT CGATGATATG CGGGTCATGA AGTGGCTTGC TCAGGTCTAC
AACCTTCGGG TCAAAGCTTC CAGCGTCATC GAGGCGGTGA GCATTGTTGC TCACGACCAC
GCCTTTCACC CAGTGCGTGA GTACCTGCAG AAGCTTGAGT GGGATCAAGT GCCGCGATTG
GAACAATGGC TCATCGATGT CATGGGGGTA GAACCCTCTG AGTACGTCAA GAAGGTCGGT
AAACGGTGGA TGATCTCGGC GGTCGCGAGG GTGATGCGGC CTGGCTGTAA GGCTGACTCG
GTCCTGATCC TTGAAGGCGC ACAGGGCGCT GGTAAGTCAA CCGCGATGAG CATCCTCGGG
GGCGACTGGT TCATGGACAC CCCCTTTGCG CTCGGCGACA AGGATGGCTT TCAGGCTATT
CGTGGCAAGT GGATTGTCGA ACTGGGCGAG CTGGACAGCT TCAACAAGGC CGAGAGTACC
AAGGCCAAGC AGTTCTTCTC TGCTTCGACA GACACCTACC GAGAAAGCTA TGGCCGGAGA
ACAAACGACG TGCCACGCCA GTGTGTTTTC GTGGGTACGA CCAACCAAGA AGAATACCTT
AAGGACGCGA CCGGCAACCG ACGCTACTGG CCTGTTGCTT GTACGAAGGT CGAACTTGAG
CAACTACGTG AAATACGTGA TCAGTTGTGG GCTGAGGCGA TGTTTTGCTT CCAGGCAGGC
GAGATCTGGT GGGTCAATCG TGACGAGTCG TCCATGTTTG CCGAGGCACA GGACGAGCGC
TTCGTGGTCG ACGAGTGGGA AGGGCTGATT CTGAATTGGC TGGAAGAGTC ACAGATCGGC
GAAACCACCA GCGGTAATGA GCTGTTGGGC ACAGCGCTGA AGCTTGATGC TGGGCACTGG
GGCAAGCCAG AGCAGATGCG CGTCGGCGCA ATCATGCACC GCCTGGGGTG GAAGCGGGCG
CGATCATCGG TGCTGTCGAA GAGTGGCTTA CGACAGTGGG TATACAAAAA GCCCGCGAAC
TGGGGCCGGA CGTCAGATCT GGTTGTCGAG AAGTTTGATG AGCCGTGCTT CGATGATTAA
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| Protein sequence | MLDEVLGQFA DYGLEPAQPL VFGKLTRCKT SQDKGKEKNG WYVIHEHRTE KNESLIFGSF
GDWRSGESQK IKVKTGRMSP EEREVMRVRQ EDAKRRAAEI AANASRRAAS RATGMFKRMP
DKGKSAYLDR KQIVGFRVRY APRSGAVLVP MSNARDQIVG LQVIYPEKQQ DTGRDKSYWP
YGMSKEGAFH LIGPEPEPGE PLLICEGYAT GASLHMATSY GVAIAFDAGN LLAVAKLMRD
RLPGRPIIIC RDDDWKTKRP NGQLWNPGEE KATNAALIVG GQVVAPIFSV ERHDKWTDFN
DLHVAEGLEA VRRQVLAVVR PPAAGGWKDQ LARSENGALI AHMQNIELIL GNDERWAGVI
SFSAFSSKIV KLRAAPYGGG TGDWADIDDM RVMKWLAQVY NLRVKASSVI EAVSIVAHDH
AFHPVREYLQ KLEWDQVPRL EQWLIDVMGV EPSEYVKKVG KRWMISAVAR VMRPGCKADS
VLILEGAQGA GKSTAMSILG GDWFMDTPFA LGDKDGFQAI RGKWIVELGE LDSFNKAEST
KAKQFFSAST DTYRESYGRR TNDVPRQCVF VGTTNQEEYL KDATGNRRYW PVACTKVELE
QLREIRDQLW AEAMFCFQAG EIWWVNRDES SMFAEAQDER FVVDEWEGLI LNWLEESQIG
ETTSGNELLG TALKLDAGHW GKPEQMRVGA IMHRLGWKRA RSSVLSKSGL RQWVYKKPAN
WGRTSDLVVE KFDEPCFDD
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