Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3378 |
Symbol | |
ID | 1185037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3818856 |
End bp | 3819920 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394729 |
Product | hypothetical protein |
Protein accession | NP_793161 |
Protein GI | 28870542 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAA CCACGTTGCA ATACAAAACC CTCATTCTGC TTTTAGTGCT GGTGAGCATC GCCTTCATAT GGATTCTGTT GCCGTTTTAC GGCGCAGTGT TCTGGGCAGT CATCCTTGGA ATCATCTTTG CGCCGGTGCA GCGCAGGTTG CAGATCAAGT TCAACTGGCC ACGCAATCTC ACCTCGCTGT GCACCCTGAC GATCTGTCTG GTCATCGCGA TTCTGCCGGT GATCGTCATC AGTGCGTTAC TGGTCCAGGA AGGCACCACG CTGTACAAGA ACGTCGAAAC CGGGCAACTG GACATCGCTG GTTATCTGGC CGAGTTCAAG AACCTGTTGC CACACTCCAT TCAGGCGTTG CTTGACCGCT TGGGCATGGG TGACCTTGAA GGTCTGCGCG ACAAGATCAC CAAAGGGGCC ATGCAGGGCA GCCAGTACCT GGCAACTCAA GCGTTCAGCT TCGGGCAGGG TACGTTCGAT TTCGTGGTGA GCGTGTTCAT CATGCTGTAC CTGCTGTACT TCTTCCTGCG CGATGGGCAG GAGCTGGTGC GCAAGATCCG TACTGCTTTC CCGTTGGGCG AGCAGCAGAA GCGTCGTCTT CAGCTCAAGT TCACCCGAGT GGTGCGGGCC ACCGTCAAAG GCAACGTAGT GGTTGCCGTG ACGCAAGGTG CGCTGGGCGG CTTCATCTTC TGGGCGCTGG ATATTCCAAG TGCTTTGCTC TGGGCGGTGA TCATGGCTTT CCTGTCCCTG TTGCCGGCAG TCGGTGCAGG GATTGTCTGG GCGCCGGTGG CTCTTTACTT CCTGCTCAGC GGCATGATCT GGCAGGGCGT GGTACTGGGA TTGTTCGGGG TGTTCGTGAT CGGCCTGGTG GATAACGTGC TGCGTCCGAT TCTGGTCGGC AAGGACACCA AGATGCCGGA CTATCTGATC CTCATTTCCA CCTTGGGCGG CATGTCGGTC TTTGGCCTGA ACGGCTTTCT GATCGGCCCT CTGATCGCTG CACTGTTCAT TTCCAGTTGG GGATTGTTCA GCGGCGCCAA GAAACCGGTG AAGCTGCCGG GCTAG
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Protein sequence | MNETTLQYKT LILLLVLVSI AFIWILLPFY GAVFWAVILG IIFAPVQRRL QIKFNWPRNL TSLCTLTICL VIAILPVIVI SALLVQEGTT LYKNVETGQL DIAGYLAEFK NLLPHSIQAL LDRLGMGDLE GLRDKITKGA MQGSQYLATQ AFSFGQGTFD FVVSVFIMLY LLYFFLRDGQ ELVRKIRTAF PLGEQQKRRL QLKFTRVVRA TVKGNVVVAV TQGALGGFIF WALDIPSALL WAVIMAFLSL LPAVGAGIVW APVALYFLLS GMIWQGVVLG LFGVFVIGLV DNVLRPILVG KDTKMPDYLI LISTLGGMSV FGLNGFLIGP LIAALFISSW GLFSGAKKPV KLPG
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