| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3340 |
|---|
| Symbol | |
|---|
| ID | 1184999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3776618 |
|---|
| End bp | 3776917 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394691 |
|---|
| Product | DsrH family protein |
|---|
| Protein accession | NP_793123 |
|---|
| Protein GI | 28870504 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2168] Uncharacterized conserved protein involved in oxidation of intracellular sulfur |
|---|
| TIGRFAM ID | [TIGR03011] sulfur relay protein TusB/DsrH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.171608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCT TGCACATTGT TTCTCATTCG CCCTTTGCCG ACACCCGTCT GGACAGCTGC
CTGCGCCTGC TGGGCACACA TGACGGCCTG TTACTGTGCG GCGATGCCGC GTATGCGTTG
ATGCCAGCCA GCGCTCAAAC ACAGAACCTG CAGCCCCTGA TCGACTCGGT GAAACTGTTC
GTCCTTGATG AAGACCTCAA GGCACGAGAC CTGCAACTGC CTGCGGGAGT GAACAGCATC
GACTACCCGG CTTTCGTCGA CCTTTCGTTG CGCTTCGACA AGGTCAACAC CTGGCTATGA
|
|---|
| Protein sequence | MATLHIVSHS PFADTRLDSC LRLLGTHDGL LLCGDAAYAL MPASAQTQNL QPLIDSVKLF
VLDEDLKARD LQLPAGVNSI DYPAFVDLSL RFDKVNTWL
|
|---|
| |